Variant #0000724157 (NC_000012.11:g.57638123T>C, NM_005412.5:c.*9979T>C (SHMT2))

Chromosome 12
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.57638123T>C
DNA change (hg38) -
Published as STAC3(NM_001286256.1):c.716A>G (p.(Asp239Gly))
ISCN -
DB-ID NDUFA4L2_000003
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 2.0E-5 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2021-02-08 18:36:18 +01:00 (CET)
Date last edited 2023-04-16 21:50:28 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SHMT2 NM_005412.5 ?/. - c.*9979T>C r.(=) p.(=)
NDUFA4L2 NM_020142.3 ?/. - c.-3842A>G r.(?) p.(=)
STAC3 NM_145064.1 ?/. - c.833A>G r.(?) p.(Asp278Gly)


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