Variant #0000800488 (NC_000002.11:g.234638210T>C, NM_000463.2:c.-30724T>C (UGT1A1))

Chromosome 2
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.234638210T>C
DNA change (hg38) -
Published as UGT1A3(NM_019093.2):c.438T>C (p.F146=)
ISCN -
DB-ID UGT1A1_000077
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 3.0E-5 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2021-09-17 14:40:49 +02:00 (CEST)
Date last edited 2023-04-16 21:50:28 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     
UGT1A1 NM_000463.2 -?/. - c.-30724T>C - r.(?) p.(=)
DNAJB3 NM_001001394.3 -?/. - c.*13915A>G - r.(=) p.(=)
UGT1A6 NM_001072.3 -?/. - c.861+35699T>C - r.(=) p.(=)
UGT1A4 NM_007120.2 -?/. - c.867+9877T>C - r.(=) p.(=)
UGT1A10 NM_019075.2 -?/. - c.856-37470T>C - r.(=) p.(=)
UGT1A8 NM_019076.4 -?/. - c.856-37470T>C - r.(=) p.(=)
UGT1A7 NM_019077.2 -?/. - c.856-37470T>C - r.(=) p.(=)
UGT1A5 NM_019078.1 -?/. - c.867+15706T>C - r.(=) p.(=)
UGT1A3 NM_019093.2 -?/. - c.438T>C - r.(?) p.(Phe146=)
UGT1A9 NM_021027.2 -?/. - c.856-37470T>C - r.(=) p.(=)
UGT1A6 NM_205862.1 -?/. - c.60+35699T>C - r.(=) p.(=)


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