Variant #0000801927 (NC_000005.9:g.140767629G>C, NC_000005.9(NM_018916.3):c.2424+41605G>C (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140767629G>C
DNA change (hg38) -
Published as PCDHGB4(NM_003736.2):c.178G>C (p.E60Q)
ISCN -
DB-ID PCDHGA1_000080
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2021-09-17 14:40:49 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 ?/. - c.-88055G>C r.(?) p.(=)
PCDHGA12 NM_003735.2 ?/. - c.-42698G>C r.(?) p.(=)
PCDHGB4 NM_003736.2 ?/. - c.178G>C r.(?) p.(Glu60Gln)
PCDHGA1 NM_018912.2 ?/. - c.2421+54957G>C r.(=) p.(=)
PCDHGA10 NM_018913.2 ?/. - c.-25114G>C r.(?) p.(=)
PCDHGA11 NM_018914.2 ?/. - c.-33166G>C r.(?) p.(=)
PCDHGA2 NM_018915.2 ?/. - c.2424+46667G>C r.(=) p.(=)
PCDHGA3 NM_018916.3 ?/. - c.2424+41605G>C r.(=) p.(=)
PCDHGA4 NM_018917.2 ?/. - c.2421+30441G>C r.(=) p.(=)
PCDHGA5 NM_018918.2 ?/. - c.2421+21311G>C r.(=) p.(=)
PCDHGA6 NM_018919.2 ?/. - c.2424+11555G>C r.(=) p.(=)
PCDHGA7 NM_018920.2 ?/. - c.2424+2739G>C r.(=) p.(=)
PCDHGA9 NM_018921.2 ?/. - c.-14891G>C r.(?) p.(=)
PCDHGB1 NM_018922.2 ?/. - c.2409+35393G>C r.(=) p.(=)
PCDHGB2 NM_018923.2 ?/. - c.2421+25506G>C r.(=) p.(=)
PCDHGB3 NM_018924.2 ?/. - c.2415+15253G>C r.(=) p.(=)
PCDHGB5 NM_018925.2 ?/. - c.-10066G>C r.(?) p.(=)
PCDHGB6 NM_018926.2 ?/. - c.-20141G>C r.(?) p.(=)
PCDHGB7 NM_018927.3 ?/. - c.-29798G>C r.(?) p.(=)
PCDHGC4 NM_018928.2 ?/. - c.-97112G>C r.(?) p.(=)
PCDHGC5 NM_018929.2 ?/. - c.-101179G>C r.(?) p.(=)
PCDHGA8 NM_032088.1 ?/. - c.-4752G>C r.(?) p.(=)


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