Variant #0000809190 (NC_000020.10:g.2843957C>G, NM_022575.2:c.1389C>G (VPS16))

Chromosome 20
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.2843957C>G
DNA change (hg38) -
Published as VPS16(NM_022575.4):c.1389C>G (p.Y463*)
ISCN -
DB-ID PCED1A_000006
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2021-09-17 14:40:49 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PTPRA NM_002836.3 +?/. - c.-1559C>G r.(?) p.(=)
VPS16 NM_022575.2 +?/. - c.1389C>G r.(?) p.(Tyr463*)
PCED1A NM_022760.4 +?/. - c.-23122G>C r.(?) p.(=)


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