Variant #0000815716 (NC_000008.10:g.42698177A>T, NM_018105.2:c.61T>A (THAP1))

Chromosome 8
Allele Both (homozygous)
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification NA
DNA change (genomic) (Relative to hg19 / GRCh37) g.42698177A>T
DNA change (hg38) g.42843034A>T
Published as -
ISCN -
DB-ID THAP1_000047 See all 3 reported entries
Variant remarks variant introduced in induced pluripotent stem cell, characterisation incl. transcript profiling; effect homozygous change much stronger compared to heterozygous
Reference Journal: Domingo 2021
ClinVar ID -
dbSNP ID -
Origin In vitro (cloned)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2021-10-21 13:59:46 +02:00 (CEST)
Date last edited N/A
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
THAP1 NM_018105.2 +/. - c.61T>A r.(?) p.(Ser21Thr)


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