Variant #0000817880 (NC_000023.10:g.53247010A>T, KDM5C(NM_004187.3):c.490T>A)

Individual ID 00387856
Chromosome X
Allele Both (homozygous)
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method ACMG
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.53247010A>T
DNA change (hg38) g.53217828A>T
Published as -
ISCN -
DB-ID KDM5C_000133
Variant remarks -
Reference PubMed: Hu 2019
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation -
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (gnomAD v.2.1.1) Variant not found in online data sets
Owner Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
KDM5C NM_004187.3 ?/. - c.490T>A r.(?) p.(Tyr164Asn)



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000389087 DNA SEQ;SEQ-NG - - KDM5C 1 Johan den Dunnen