Variant #0000817937 (NC_000001.10:g.171178090=, NM_001460.3:c.1414= (FMO2))

Chromosome 1
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification association
DNA change (genomic) (Relative to hg19 / GRCh37) g.171178090=
DNA change (hg38) g.171208951C>T
Published as -
ISCN -
DB-ID FMO2_000002
Variant remarks Ancestral allele (C) is associated with reduced risk for active TB. Major allele (T) is associated with a risk of pulmonary toxicity by inducing the adverse metabolism of particular anti-TB drugs.
Reference PubMed: Mekonnen 2017, Journal: Mekonnen 2017
ClinVar ID -
dbSNP ID rs6661174
Origin Germline
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.01073 View details
Owner Ephrem Mekonnen
Database submission license No license selected
Created by Ephrem Mekonnen
Date created 2021-10-31 13:52:44 +01:00 (CET)
Date last edited 2023-01-31 10:55:14 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
FMO2 NM_001460.3 +/. 9 c.1414= r.(?) p.(Ter472=)
FMO2 NM_001460.5 +/. 9 c.1414C>T r.(?) p.(Gln472Ter)



Screenings

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