Variant #0000862468 (NC_000011.9:g.18309195_18309198del, NM_181507.1:c.2603_2606del (HPS5))

Chromosome 11
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.18309195_18309198del
DNA change (hg38) -
Published as HPS5(NM_181507.1):c.2603_2606delTCAA (p.I868Sfs*26)
ISCN -
DB-ID HPS5_000077
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2022-05-09 15:51:19 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SAA1 NM_000331.4 +/. - c.*17793_*17796del r.(=) p.(=)
HPS5 NM_181507.1 +/. - c.2603_2606del r.(?) p.(Ile868Serfs*26)


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