Variant #0000888228 (NC_000008.10:g.145638254C>T, NM_013291.2:c.-3596G>A (CPSF1))

Chromosome 8
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.145638254C>T
DNA change (hg38) -
Published as SLC39A4(NM_017767.2):c.1629G>A (p.T543=), SLC39A4(NM_017767.3):c.1629G>A (p.T543=)
ISCN -
DB-ID CPSF1_000021 See all 2 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00038 View details
Owner VKGL-NL_VUmc
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_VUmc
Date created 2022-11-01 13:01:21 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CPSF1 NM_013291.2 ?/. - c.-3596G>A r.(?) p.(=)
SLC39A4 NM_017767.2 ?/. - c.1629G>A r.(?) p.(Thr543=)
SLC39A4 NM_130849.2 ?/. - c.1704G>A r.(?) p.(Thr568=)


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