Variant #0000895513 (NC_000021.8:g.45950970G>A, NM_144991.2:c.589C>T (TSPEAR))

Chromosome 21
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.45950970G>A
DNA change (hg38) -
Published as TSPEAR(NM_001272037.1):c.385C>T (p.R129*), TSPEAR(NM_144991.3):c.589C>T (p.R197*)
ISCN -
DB-ID TSPEAR_000023 See all 3 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00033 View details
Owner VKGL-NL_VUmc
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_VUmc
Date created 2022-11-01 13:41:49 +01:00 (CET)
Date last edited 2023-01-11 15:44:22 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSPEAR NM_144991.2 +/. - c.589C>T r.(?) p.(Arg197Ter)
KRTAP12-2 NM_181684.2 +/. - c.*135393C>T r.(=) p.(=)
KRTAP12-1 NM_181686.1 +/. - c.*150778C>T r.(=) p.(=)
KRTAP10-10 NM_181688.1 +/. - c.-106365G>A r.(?) p.(=)
KRTAP10-4 NM_198687.1 +/. - c.-42666G>A r.(?) p.(=)
KRTAP10-6 NM_198688.2 +/. - c.*60298C>T r.(=) p.(=)
KRTAP10-7 NM_198689.2 +/. - c.-69552G>A r.(?) p.(=)
KRTAP10-9 NM_198690.2 +/. - c.-96119G>A r.(?) p.(=)
KRTAP10-1 NM_198691.2 +/. - c.*8215C>T r.(=) p.(=)
KRTAP10-11 NM_198692.2 +/. - c.-115406G>A r.(?) p.(=)
KRTAP10-2 NM_198693.2 +/. - c.*19604C>T r.(=) p.(=)
KRTAP10-5 NM_198694.2 +/. - c.*48670C>T r.(=) p.(=)
KRTAP10-8 NM_198695.2 +/. - c.-81048G>A r.(?) p.(=)
KRTAP10-3 NM_198696.2 +/. - c.*26963C>T r.(=) p.(=)
KRTAP12-3 NM_198697.2 +/. - c.-126927G>A r.(?) p.(=)
KRTAP12-4 NM_198698.1 +/. - c.*123223C>T r.(=) p.(=)
KRTAP10-12 NM_198699.1 +/. - c.-166147G>A r.(?) p.(=)


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