Variant #0000912365 (NC_000005.9:g.79950708_79950725del, NM_002439.4:c.162_179del (MSH3))

Chromosome 5
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.79950708_79950725del
DNA change (hg38) -
Published as DHFR(NM_000791.4):c.-409_-392delGGCCGCTGCAGCCGCTGC, MSH3(NM_002439.4):c.154_171del (p.(Ala57_Ala62del)), MSH3(NM_002439.5):c.162_179delTGCAGCGGCCGC...
ISCN -
DB-ID DHFR_000020 See all 5 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.2473 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2023-01-11 15:44:22 +01:00 (CET)
Date last edited 2024-04-19 20:27:30 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
DHFR NM_000791.3 -/. - c.-409_-392del r.(?) p.(=)
MTRNR2L2 NM_001190470.1 -/. - c.-4812_-4795del r.(?) p.(=)
MSH3 NM_002439.4 -/. - c.162_179del r.(?) p.(Ala57_Ala62del)


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