Variant #0000923200 (NC_000001.10:g.46501250C>T, NM_005727.3:c.-139973C>T (TSPAN1))

Chromosome 1
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.46501250C>T
DNA change (hg38) -
Published as MAST2(NM_001319245.1):c.4906C>T (p.(Leu1636Phe))
ISCN -
DB-ID PIK3R3_000017
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00297 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2023-04-16 21:50:28 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PIK3R3 NM_003629.3 -?/. - c.*8095G>A r.(=) p.(=)
TSPAN1 NM_005727.3 -?/. - c.-139973C>T r.(?) p.(=)
MAST2 NM_015112.2 -?/. - c.4909C>T r.(?) p.(Leu1637Phe)


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