Variant #0000929705 (NC_000010.10:g.88423539G>C, NM_001080114.1:c.-4910G>C (LDB3))

Chromosome 10
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.88423539G>C
DNA change (hg38) -
Published as OPN4(NM_001030015.2):c.1411G>C (p.(Glu471Gln))
ISCN -
DB-ID LDB3_000410
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00012 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2023-07-07 10:10:56 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LDB3 NM_001080114.1 -?/. - c.-4910G>C r.(?) p.(=)
LDB3 NM_007078.2 -?/. - c.-4910G>C r.(?) p.(=)
OPN4 NM_033282.3 -?/. - c.1378G>C r.(?) p.(Glu460Gln)


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