Variant #0000963690 (NC_000005.9:g.79950708_79950716del, NM_002439.4:c.162_170del (MSH3))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.79950708_79950716del
DNA change (hg38) -
Published as DHFR(NM_000791.3):c.-397_-389del (p.(=)), MSH3(NM_002439.5):c.162_170delTGCAGCGGC (p.A60_A62del)
ISCN -
DB-ID DHFR_000054 See all 2 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2024-02-26 20:06:56 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
DHFR NM_000791.3 -?/. - c.-397_-389del r.(?) p.(=)
MTRNR2L2 NM_001190470.1 -?/. - c.-4800_-4792del r.(?) p.(=)
MSH3 NM_002439.4 -?/. - c.162_170del r.(?) p.(Ala60_Ala62del)


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