Variant #0000976603 (NC_000005.9:g.140725143T>A, NM_018916.3:c.1543T>A (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140725143T>A
DNA change (hg38) -
Published as PCDHGA3(NM_018916.4):c.1543T>A (p.(Tyr515Asn))
ISCN -
DB-ID PCDHGA1_000087
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00011 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2024-04-19 20:27:30 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 ?/. - c.-130541T>A r.(?) p.(=)
PCDHGA12 NM_003735.2 ?/. - c.-85184T>A r.(?) p.(=)
PCDHGB4 NM_003736.2 ?/. - c.-42309T>A r.(?) p.(=)
PCDHGA1 NM_018912.2 ?/. - c.2421+12471T>A r.(=) p.(=)
PCDHGA10 NM_018913.2 ?/. - c.-67600T>A r.(?) p.(=)
PCDHGA11 NM_018914.2 ?/. - c.-75652T>A r.(?) p.(=)
PCDHGA2 NM_018915.2 ?/. - c.2424+4181T>A r.(=) p.(=)
PCDHGA3 NM_018916.3 ?/. - c.1543T>A r.(?) p.(Tyr515Asn)
PCDHGA4 NM_018917.2 ?/. - c.-9625T>A r.(?) p.(=)
PCDHGA5 NM_018918.2 ?/. - c.-18755T>A r.(?) p.(=)
PCDHGA6 NM_018919.2 ?/. - c.-28508T>A r.(?) p.(=)
PCDHGA7 NM_018920.2 ?/. - c.-37324T>A r.(?) p.(=)
PCDHGA9 NM_018921.2 ?/. - c.-57377T>A r.(?) p.(=)
PCDHGB1 NM_018922.2 ?/. - c.-4685T>A r.(?) p.(=)
PCDHGB2 NM_018923.2 ?/. - c.-14560T>A r.(?) p.(=)
PCDHGB3 NM_018924.2 ?/. - c.-24819T>A r.(?) p.(=)
PCDHGB5 NM_018925.2 ?/. - c.-52552T>A r.(?) p.(=)
PCDHGB6 NM_018926.2 ?/. - c.-62627T>A r.(?) p.(=)
PCDHGB7 NM_018927.3 ?/. - c.-72284T>A r.(?) p.(=)
PCDHGC4 NM_018928.2 ?/. - c.-139598T>A r.(?) p.(=)
PCDHGC5 NM_018929.2 ?/. - c.-143665T>A r.(?) p.(=)
PCDHGA8 NM_032088.1 ?/. - c.-47238T>A r.(?) p.(=)


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