Variant #0000994708 (NC_000005.9:g.140389307G>T, NM_018900.2:c.2638G>T (PCDHA1))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140389307G>T
DNA change (hg38) -
Published as PCDHA11(NM_018902.3):c.2635G>T (p.(Gly879Cys))
ISCN -
DB-ID PCDHA1_000075
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 1.0E-5 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2024-08-28 13:16:32 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHAC1 NM_018898.3 ?/. - c.2677G>T r.(?) p.(Gly893Cys)
PCDHAC2 NM_018899.5 ?/. - c.2809G>T r.(?) p.(Gly937Cys)
PCDHA1 NM_018900.2 ?/. - c.2638G>T r.(?) p.(Gly880Cys)
PCDHA10 NM_018901.2 ?/. - c.2632G>T r.(?) p.(Gly878Cys)
PCDHA11 NM_018902.3 ?/. - c.2635G>T r.(?) p.(Gly879Cys)
PCDHA12 NM_018903.2 ?/. - c.2611G>T r.(?) p.(Gly871Cys)
PCDHA13 NM_018904.2 ?/. - c.2638G>T r.(?) p.(Gly880Cys)
PCDHA2 NM_018905.2 ?/. - c.2632G>T r.(?) p.(Gly878Cys)
PCDHA3 NM_018906.2 ?/. - c.2638G>T r.(?) p.(Gly880Cys)
PCDHA4 NM_018907.2 ?/. - c.2629G>T r.(?) p.(Gly877Cys)
PCDHA5 NM_018908.2 ?/. - c.2596G>T r.(?) p.(Gly866Cys)
PCDHA6 NM_018909.2 ?/. - c.2638G>T r.(?) p.(Gly880Cys)
PCDHA7 NM_018910.2 ?/. - c.2599G>T r.(?) p.(Gly867Cys)
PCDHA8 NM_018911.2 ?/. - c.2638G>T r.(?) p.(Gly880Cys)
PCDHA9 NM_031857.1 ?/. - c.2638G>T r.(?) p.(Gly880Cys)


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