Variant #0000994714 (NC_000005.9:g.140812178T>G, NC_000005.9(NM_018916.3):c.2425-62196T>G (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140812178T>G
DNA change (hg38) -
Published as PCDHGA12(NM_003735.2):c.1852T>G (p.(Ser618Ala))
ISCN -
DB-ID PCDHGA1_000092
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.0005 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2024-08-28 13:16:32 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 -?/. - c.-43506T>G r.(?) p.(=)
PCDHGA12 NM_003735.2 -?/. - c.1852T>G r.(?) p.(Ser618Ala)
PCDHGB4 NM_003736.2 -?/. - c.2397+42330T>G r.(=) p.(=)
PCDHGA1 NM_018912.2 -?/. - c.2422-62196T>G r.(=) p.(=)
PCDHGA10 NM_018913.2 -?/. - c.2436+17000T>G r.(=) p.(=)
PCDHGA11 NM_018914.2 -?/. - c.2433+8951T>G r.(=) p.(=)
PCDHGA2 NM_018915.2 -?/. - c.2425-62196T>G r.(=) p.(=)
PCDHGA3 NM_018916.3 -?/. - c.2425-62196T>G r.(=) p.(=)
PCDHGA4 NM_018917.2 -?/. - c.2422-62196T>G r.(=) p.(=)
PCDHGA5 NM_018918.2 -?/. - c.2422-62196T>G r.(=) p.(=)
PCDHGA6 NM_018919.2 -?/. - c.2424+56104T>G r.(=) p.(=)
PCDHGA7 NM_018920.2 -?/. - c.2424+47288T>G r.(=) p.(=)
PCDHGA9 NM_018921.2 -?/. - c.2424+27235T>G r.(=) p.(=)
PCDHGB1 NM_018922.2 -?/. - c.2410-62196T>G r.(=) p.(=)
PCDHGB2 NM_018923.2 -?/. - c.2422-62196T>G r.(=) p.(=)
PCDHGB3 NM_018924.2 -?/. - c.2415+59802T>G r.(=) p.(=)
PCDHGB5 NM_018925.2 -?/. - c.2397+32087T>G r.(=) p.(=)
PCDHGB6 NM_018926.2 -?/. - c.2418+21991T>G r.(=) p.(=)
PCDHGB7 NM_018927.3 -?/. - c.2415+12337T>G r.(=) p.(=)
PCDHGC4 NM_018928.2 -?/. - c.-52563T>G r.(?) p.(=)
PCDHGC5 NM_018929.2 -?/. - c.-56630T>G r.(?) p.(=)
PCDHGA8 NM_032088.1 -?/. - c.2424+37374T>G r.(=) p.(=)


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