Variant #0001004966 (NC_000019.9:g.49138923C>T, NM_001204158.2:c.*5893C>T (SPHK2))

Chromosome 19
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.49138923C>T
DNA change (hg38) -
Published as DBP(NM_001352.3):c.464G>A (p.(Gly155Asp))
ISCN -
DB-ID CA11_000002
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00049 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2024-08-28 13:16:32 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SPHK2 NM_001204158.2 -?/. - c.*5893C>T r.(=) p.(=)
CA11 NM_001217.3 -?/. - c.*2453G>A r.(=) p.(=)
DBP NM_001352.3 -?/. - c.464G>A r.(?) p.(Gly155Asp)
NTN5 NM_145807.1 -?/. - c.*26011G>A r.(=) p.(=)


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