Variant #0001013901 (NC_000003.11:g.48508733G>A, NM_016381.4:c.844G>A (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.48508733G>A
DNA change (hg38) -
Published as TREX1(NM_007248.4):c.649G>A (p.G217S), TREX1(NM_007248.5):c.649G>A (p.G217S), TREX1(NM_033629.6):c.679G>A (p.(Gly227Ser), p.G227S)
ISCN -
DB-ID TREX1_000028 See all 6 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00011 View details
Owner VKGL-NL_Nijmegen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Nijmegen
Date created 2024-10-29 20:49:11 +01:00 (CET)
Date last edited 2025-11-01 13:22:20 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 -?/. - c.844G>A r.(?) p.(Gly282Ser)
SHISA5 NM_016479.3 -?/. - c.*1773C>T r.(=) p.(=)
TREX1 NM_033629.3 -?/. - c.679G>A r.(?) p.(Gly227Ser)
ATRIP NM_130384.2 -?/. - c.*1780G>A r.(=) p.(=)


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