Variant #0001015811 (NC_000019.9:g.47112123C>T, NM_001205281.1:c.-7897G>A (PPP5D1))

Chromosome 19
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.47112123C>T
DNA change (hg38) -
Published as CALM3(NM_001329922.1):c.306C>T (p.S102=)
ISCN -
DB-ID CALM3_000014
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00064 View details
Owner VKGL-NL_AMC
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_AMC
Date created 2024-10-29 21:08:56 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PTGIR NM_000960.3 -?/. - c.*12414G>A r.(=) p.(=)
PPP5D1 NM_001205281.1 -?/. - c.-7897G>A r.(?) p.(=)
CALM3 NM_005184.2 -?/. - c.306C>T r.(?) p.(=)


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