Variant #0001025697 (NC_000010.10:g.100177984C>T, NM_000195.3:c.1888G>A (HPS1))

Chromosome 10
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.100177984C>T
DNA change (hg38) -
Published as HPS1(NM_000195.5):c.1888G>A (p.V630I), HPS1(NM_001322487.1):c.916G>A (p.V306I)
ISCN -
DB-ID PYROXD2_000007 See all 4 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.0013 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2025-02-07 18:57:27 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
HPS1 NM_000195.3 ?/. - c.1888G>A r.(?) p.(Val630Ile)
PYROXD2 NM_032709.2 ?/. - c.-3092G>A r.(?) p.(=)


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