Variant #0001034005 (NC_000003.11:g.48508028G>A, NM_016381.4:c.139G>A (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.48508028G>A
DNA change (hg38) -
Published as ATRIP(NM_130384.3):c.*1075G>A, TREX1(NM_033629.6):c.-26-1G>A
ISCN -
DB-ID TREX1_000061 See all 3 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 8.0E-5 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2025-05-05 21:14:00 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 ?/. - c.139G>A r.(?) p.(Gly47Ser)
SHISA5 NM_016479.3 ?/. - c.*2478C>T r.(=) p.(=)
TREX1 NM_033629.3 ?/. - c.-26-1G>A r.spl? p.?
ATRIP NM_130384.2 ?/. - c.*1075G>A r.(=) p.(=)


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