Variant #0001034946 (NC_000005.9:g.140731049_140731059delinsAGGGAGCAGAA, NC_000005.9(NM_018916.3):c.2424+5025_2424+5035delinsAGGGAGCAGAA (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140731049_140731059delinsAGGGAGCAGAA
DNA change (hg38) -
Published as PCDHGB1(NM_018922.3):c.1222_1232delinsAGGGAGCAGAA (p.(Thr411Lys))
ISCN -
DB-ID PCDHGA1_000094
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2025-05-05 21:14:00 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 -?/. - c.-124635_-124625delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA12 NM_003735.2 -?/. - c.-79278_-79268delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGB4 NM_003736.2 -?/. - c.-36403_-36393delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA1 NM_018912.2 -?/. - c.2421+18377_2421+18387delinsAGGGAGCAGAA r.(=) p.(=)
PCDHGA10 NM_018913.2 -?/. - c.-61694_-61684delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA11 NM_018914.2 -?/. - c.-69746_-69736delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA2 NM_018915.2 -?/. - c.2424+10087_2424+10097delinsAGGGAGCAGAA r.(=) p.(=)
PCDHGA3 NM_018916.3 -?/. - c.2424+5025_2424+5035delinsAGGGAGCAGAA r.(=) p.(=)
PCDHGA4 NM_018917.2 -?/. - c.-3719_-3709delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA5 NM_018918.2 -?/. - c.-12849_-12839delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA6 NM_018919.2 -?/. - c.-22602_-22592delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA7 NM_018920.2 -?/. - c.-31418_-31408delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA9 NM_018921.2 -?/. - c.-51471_-51461delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGB1 NM_018922.2 -?/. - c.1222_1232delinsAGGGAGCAGAA r.(?) p.(Thr411Lys)
PCDHGB2 NM_018923.2 -?/. - c.-8654_-8644delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGB3 NM_018924.2 -?/. - c.-18913_-18903delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGB5 NM_018925.2 -?/. - c.-46646_-46636delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGB6 NM_018926.2 -?/. - c.-56721_-56711delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGB7 NM_018927.3 -?/. - c.-66378_-66368delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGC4 NM_018928.2 -?/. - c.-133692_-133682delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGC5 NM_018929.2 -?/. - c.-137759_-137749delinsAGGGAGCAGAA r.(?) p.(=)
PCDHGA8 NM_032088.1 -?/. - c.-41332_-41322delinsAGGGAGCAGAA r.(?) p.(=)


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