Variant #0001034947 (NC_000005.9:g.140731059C>A, NC_000005.9(NM_018916.3):c.2424+5035C>A (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140731059C>A
DNA change (hg38) -
Published as PCDHGB1(NM_018922.3):c.1232C>A (p.(Thr411Lys))
ISCN -
DB-ID PCDHGA1_000095
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00664 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2025-05-05 21:14:00 +02:00 (CEST)
Date last edited N/A
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 -?/. - c.-124625C>A r.(?) p.(=)
PCDHGA12 NM_003735.2 -?/. - c.-79268C>A r.(?) p.(=)
PCDHGB4 NM_003736.2 -?/. - c.-36393C>A r.(?) p.(=)
PCDHGA1 NM_018912.2 -?/. - c.2421+18387C>A r.(=) p.(=)
PCDHGA10 NM_018913.2 -?/. - c.-61684C>A r.(?) p.(=)
PCDHGA11 NM_018914.2 -?/. - c.-69736C>A r.(?) p.(=)
PCDHGA2 NM_018915.2 -?/. - c.2424+10097C>A r.(=) p.(=)
PCDHGA3 NM_018916.3 -?/. - c.2424+5035C>A r.(=) p.(=)
PCDHGA4 NM_018917.2 -?/. - c.-3709C>A r.(?) p.(=)
PCDHGA5 NM_018918.2 -?/. - c.-12839C>A r.(?) p.(=)
PCDHGA6 NM_018919.2 -?/. - c.-22592C>A r.(?) p.(=)
PCDHGA7 NM_018920.2 -?/. - c.-31408C>A r.(?) p.(=)
PCDHGA9 NM_018921.2 -?/. - c.-51461C>A r.(?) p.(=)
PCDHGB1 NM_018922.2 -?/. - c.1232C>A r.(?) p.(Thr411Lys)
PCDHGB2 NM_018923.2 -?/. - c.-8644C>A r.(?) p.(=)
PCDHGB3 NM_018924.2 -?/. - c.-18903C>A r.(?) p.(=)
PCDHGB5 NM_018925.2 -?/. - c.-46636C>A r.(?) p.(=)
PCDHGB6 NM_018926.2 -?/. - c.-56711C>A r.(?) p.(=)
PCDHGB7 NM_018927.3 -?/. - c.-66368C>A r.(?) p.(=)
PCDHGC4 NM_018928.2 -?/. - c.-133682C>A r.(?) p.(=)
PCDHGC5 NM_018929.2 -?/. - c.-137749C>A r.(?) p.(=)
PCDHGA8 NM_032088.1 -?/. - c.-41322C>A r.(?) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.