Variant #0001045663 (NC_000001.10:g.235634245_235634252del, NM_152490.3:c.674_681del (B3GALNT2))

Chromosome 1
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.235634245_235634252del
DNA change (hg38) -
Published as B3GALNT2(NM_152490.5):c.674_681delGGGAGAGC (p.W225Sfs*18)
ISCN -
DB-ID TBCE_000114
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 1.0E-5 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2025-07-08 13:22:38 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TBCE NM_003193.3 +/. - c.*22168_*22175del r.(=) p.(=)
B3GALNT2 NM_152490.3 +/. - c.674_681del r.(?) p.(Trp225Serfs*18)


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