Variant #0001052125 (NC_000005.9:g.140255811del, NC_000005.9(NM_018900.2):c.2394+87542del (PCDHA1))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140255811del
DNA change (hg38) -
Published as PCDHA12(NM_018903.4):c.754del (p.(Ser252Leufs*10))
ISCN -
DB-ID PCDHA1_000084
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.0001 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2025-11-01 13:22:20 +01:00 (CET)
Date last edited N/A
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHAC1 NM_018898.3 ?/. - c.-50667del r.(?) p.(=)
PCDHAC2 NM_018899.5 ?/. - c.-90541del r.(?) p.(=)
PCDHA1 NM_018900.2 ?/. - c.2394+87542del r.(=) p.(=)
PCDHA10 NM_018901.2 ?/. - c.2388+17790del r.(=) p.(=)
PCDHA11 NM_018902.3 ?/. - c.2391+4732del r.(=) p.(=)
PCDHA12 NM_018903.2 ?/. - c.754del r.(?) p.(Ser252Leufs*10)
PCDHA13 NM_018904.2 ?/. - c.-6043del r.(?) p.(=)
PCDHA2 NM_018905.2 ?/. - c.2388+78874del r.(=) p.(=)
PCDHA3 NM_018906.2 ?/. - c.2394+72635del r.(=) p.(=)
PCDHA4 NM_018907.2 ?/. - c.2385+66654del r.(=) p.(=)
PCDHA5 NM_018908.2 ?/. - c.2352+52099del r.(=) p.(=)
PCDHA6 NM_018909.2 ?/. - c.2394+45741del r.(=) p.(=)
PCDHA7 NM_018910.2 ?/. - c.2355+39488del r.(=) p.(=)
PCDHA8 NM_018911.2 ?/. - c.2394+32511del r.(=) p.(=)
PCDHA9 NM_031857.1 ?/. - c.2394+25337del r.(=) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.