Variant #0001052130 (NC_000005.9:g.140711225C>T, NM_018916.3:c.-12376C>T (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140711225C>T
DNA change (hg38) -
Published as PCDHGA1(NM_018912.3):c.974C>T (p.(Ala325Val))
ISCN -
DB-ID PCDHGA1_000100
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 2.0E-5 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2025-11-01 13:22:20 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 ?/. - c.-144459C>T r.(?) p.(=)
PCDHGA12 NM_003735.2 ?/. - c.-99102C>T r.(?) p.(=)
PCDHGB4 NM_003736.2 ?/. - c.-56227C>T r.(?) p.(=)
PCDHGA1 NM_018912.2 ?/. - c.974C>T r.(?) p.(Ala325Val)
PCDHGA10 NM_018913.2 ?/. - c.-81518C>T r.(?) p.(=)
PCDHGA11 NM_018914.2 ?/. - c.-89570C>T r.(?) p.(=)
PCDHGA2 NM_018915.2 ?/. - c.-7314C>T r.(?) p.(=)
PCDHGA3 NM_018916.3 ?/. - c.-12376C>T r.(?) p.(=)
PCDHGA4 NM_018917.2 ?/. - c.-23543C>T r.(?) p.(=)
PCDHGA5 NM_018918.2 ?/. - c.-32673C>T r.(?) p.(=)
PCDHGA6 NM_018919.2 ?/. - c.-42426C>T r.(?) p.(=)
PCDHGA7 NM_018920.2 ?/. - c.-51242C>T r.(?) p.(=)
PCDHGA9 NM_018921.2 ?/. - c.-71295C>T r.(?) p.(=)
PCDHGB1 NM_018922.2 ?/. - c.-18603C>T r.(?) p.(=)
PCDHGB2 NM_018923.2 ?/. - c.-28478C>T r.(?) p.(=)
PCDHGB3 NM_018924.2 ?/. - c.-38737C>T r.(?) p.(=)
PCDHGB5 NM_018925.2 ?/. - c.-66470C>T r.(?) p.(=)
PCDHGB6 NM_018926.2 ?/. - c.-76545C>T r.(?) p.(=)
PCDHGB7 NM_018927.3 ?/. - c.-86202C>T r.(?) p.(=)
PCDHGC4 NM_018928.2 ?/. - c.-153516C>T r.(?) p.(=)
PCDHGC5 NM_018929.2 ?/. - c.-157583C>T r.(?) p.(=)
PCDHGA8 NM_032088.1 ?/. - c.-61156C>T r.(?) p.(=)


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