Variant #0001055057 (NC_000015.9:g.42166201G>A, NM_016642.3:c.4732C>T (SPTBN5))

Chromosome 15
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.42166201G>A
DNA change (hg38) -
Published as SPTBN5(NM_016642.4):c.4732C>T (p.(Arg1578Trp))
ISCN -
DB-ID JMJD7-PLA2G4B_000057
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00013 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2025-11-01 13:22:20 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PLA2G4B NM_001114633.1 ?/. - c.*26143G>A r.(=) p.(=)
JMJD7-PLA2G4B NM_001198588.1 ?/. - c.*26313G>A r.(=) p.(=)
SPTBN5 NM_016642.3 ?/. - c.4732C>T r.(?) p.(Arg1578Trp)


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