Variant #0001066564 (NC_000016.9:g.88926081G>A, NM_000512.4:c.-2796C>T (GALNS))

Chromosome 16
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.88926081G>A
DNA change (hg38) -
Published as TRAPPC2L(NM_001318525.2):c.217G>A (p.(Val73Ile))
ISCN -
DB-ID GALNS_000125
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.0009 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2026-01-20 18:57:21 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
GALNS NM_000512.4 -?/. - c.-2796C>T r.(?) p.(=)
PABPN1L NM_001080487.2 -?/. - c.*4083C>T r.(=) p.(=)
TRAPPC2L NM_001318525.1 -?/. - c.217G>A r.(?) p.(Val73Ile)
TRAPPC2L NM_016209.3 -?/. - c.217G>A r.(?) p.(Val73Ile)


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