Full data view for gene COL5A2

Ehlers Danlos Syndrome Variant Database


Information The variants shown are described using the NM_000393.3 transcript reference sequence.

5 entries on 1 page. Showing entries 1 - 5.
Legend   How to query  

Effect     

Exon     

AscendingDNA change (cDNA)     

RNA change     

Protein     

Predicted     

Type/DNA     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

Country     

Population     

Age at death     

VIP     

Data_av     

Treatment     

Panel size     

Owner     
-/. - c.4240G>A r.(?) p.(Asp1414Asn) - - Unknown - benign g.189899755C>T g.189035029C>T COL5A2(NM_000393.4):c.4240G>A (p.D1414N), COL5A2(NM_000393.5):c.4240G>A (p.D1414N) - COL5A2_000012 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
?/. - c.4240G>A r.(?) p.(Asp1414Asn) - - Parent #2 - VUS g.189899755C>T g.189035029C>T - - COL5A2_000012 - PubMed: Arno 2017 - - Germline - - - - - DNA SEQ, SEQ-NG - WGS retinal disease FamGC18203Pat1 PubMed: Arno 2017 3-generation family, 1 affeted, unaffected heterozygous carrier parents F - - - - - - - 1 Johan den Dunnen
-/? 53 c.4240G>A r.(?) p.(Asp1414Asn) missense substitution Unknown - VUS g.189899755C>T - NM_000393.2:c.4388G>A - COL5A2_000012 - PubMed: Grond-Ginsbach et al., 2002 - - Unknown - - - - - DNA, RNA PCR, RT-PCR, SEQ, SSCA - - ? - PubMed: Grond-Ginsbach et al., 2002 This mutation was originally described as a G>A substitution in NM_000393.2 at position 4388 counting from the start of the sequence.This variant is reported as being silent, but it actually results in a missense substitution. - - - white - - - - 1 Raymond Dalgleish
-?/. - c.4240G>A r.(?) p.(Asp1414Asn) - - Unknown - likely benign g.189899755C>T - COL5A2(NM_000393.4):c.4240G>A (p.D1414N), COL5A2(NM_000393.5):c.4240G>A (p.D1414N) - COL5A2_000012 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
-/. - c.4240G>A r.(?) p.(Asp1414Asn) - - Unknown - benign g.189899755C>T - COL5A2(NM_000393.4):c.4240G>A (p.D1414N), COL5A2(NM_000393.5):c.4240G>A (p.D1414N) - COL5A2_000012 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
Legend   How to query  


Screenscraping/webscraping (interacting with LOVD using scripts to download data) is strictly prohibited.
Use our APIs to retrieve data.