Global Variome shared LOVD
MUTYH (mutY homolog (E. coli))
LOVD v.3.0 Build 30b [
Current LOVD status
]
Register as submitter
|
Log in
Curator:
Ian Frayling
View all genes
View MUTYH gene homepage
View graphs about the MUTYH gene database
Create a new gene entry
View all transcripts
View all transcripts of gene MUTYH
Create a new transcript information entry
View all variants
View all variants affecting transcripts
View unique variants in gene MUTYH
View all variants in gene MUTYH
Full data view for gene MUTYH
Create a new data submission
View active genomic custom columns
Enable more genomic custom columns
View all individuals
View all individuals with variants in gene MUTYH
Create a new data submission
View active custom columns
Enable more custom columns
View all diseases
View all diseases associated with gene MUTYH
Create a new disease information entry
View available phenotype columns
View all screenings
View all screenings for gene MUTYH
Create a new data submission
View active custom columns
Enable more custom columns
Submit new data
Full data view for gene MUTYH
APC (adenomatous polyposis coli)
CDH1 (cadherin 1, type 1, E-cadherin (epithelial))
EPCAM (epithelial cell adhesion molecule)
GALNT12 (UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalacto...)
MLH1 (mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli))
MLH3 (mutL homolog 3 (E. coli))
MSH2 (mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli))
MSH6 (mutS homolog 6 (E. coli))
MUTYH (MUTYH (mutY homolog (E. coli))
PMS2 (PMS2 postmeiotic segregation increased 2 (S. cerevisiae))
The variants shown are described using the NM_001128425.1 transcript reference sequence.
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Effect
: The variant's effect on the function of the gene/protein, displayed in the format 'R/C'. R is the value reported by the source (publication, submitter) and this classification may vary between records. C is the value concluded by the curator. Note that in some database the curator uses Summary records to give details on the classification of the variant.Values used: '+' indicating the variant affects function, '+?' probably affects function, '-' does not affect function, '-?' probably does not affect function, '?' effect unknown, '.' effect was not classified.
Exon
: number of exon/intron containing variant; 2 = exon 2, 12i = intron 12, 2i_7i = from intron 2 to intron 7, 8i_9 = intron 8/exon 9 boundary, _1 = 5' to exon 1, 18_ = 3' of exon 18, _1_18_ = encompassing the entire 18-exon gene
DNA change (cDNA)
: description of variant at DNA level, based on a coding DNA reference sequence (following HGVS recommendations); e.g. c.123C>T, c.123_145del, c.123_126dup. For deletions/duplications extending beyond the reference transcript resp. {0}/{2} is used to replace del/dup. Extent of the deletion/duplication should be specified using the genomic description (g.). "-" indicates the variant described on genomic level does not affect the coding DNA reference sequence.
RNA change
: description of variant at RNA level (following HGVS recommendations).
r.123c>u
r.? = unknown
r.(?) = RNA not analysed but probably transcribed copy of DNA variant
r.spl? = RNA not analysed but variant probably affects splicing
r.(spl?) = RNA not analysed but variant may affect splicing
r.0? = change expected to abolish transcription
Protein
: description of variant at protein level (following HGVS recommendations).
p.(Arg345Pro) = change predicted from DNA (RNA not analysed)
p.Arg345Pro = change derived from RNA analysis
p.? = unknown effect
p.0? = probably no protein produced
P-domain
: region/domain protein affected
Allele
: On which allele is the variant located? Does not necessarily imply inheritance! 'Paternal' (confirmed or inferred), 'Maternal' (confirmed or inferred), 'Parent #1' or #2 for compound heterozygosity without having screened the parents, 'Unknown' for heterozygosity without having screened the parents, 'Both' for homozygozity.
Classification method
: The method used for the clinical classification of this variant.
All options:
ACMG
ACGS
EAHAD-CFDB
ENIGMA
IARC
InSiGHT
kConFab
other
Clinical classification
: Clinical classification of variant, preferably based on standardised criteria (e.g. ACMG), directed on the clinical consequences as published/submitted, indicated using an enriched system including inheritance: e.g. pathogenic, pathogenic (dominant), pathogenic (recessive), pathogenic (!), pathogenic (maternal), pathogenic (paternal). Standard inheritance is covered by dominant/recessive, imprinting by maternal/paternal. A '!' warns for exceptional circumstances to be explained in the 'Remarks' field (low penetrance, variants pathogenic in heterozygous state only, hypomorphic/hypermorphic variants, protective variants, etc.). Non-disease consequences (e.g. drug metabolism (pharmacogenetics), risk factor, blood group, tasting bitter) are indicated using additions to the benign classification; benign (dominant), benign (recessive), benign (!), etc. The value 'association' is used for variants associated with a phenotype and 'NA' for variants from in vitro/in silico records. NOTE: classification may differ from the opinion of the curator as given in a variant SUMMARY-record or the 'Functional effect concluded'). NOTE: pathogenic/likely pathogenic should go together with "variant (probably) affects function" In ClassFunctional.
All options:
pathogenic
pathogenic (dominant)
pathogenic (recessive)
pathogenic (!)
pathogenic (maternal)
pathogenic (paternal)
likely pathogenic
likely pathogenic (dominant)
likely pathogenic (recessive)
likely pathogenic (!)
likely pathogenic (maternal)
likely pathogenic (paternal)
VUS
VUS (!)
likely benign
likely benign (dominant)
likely benign (recessive)
likely benign (!)
likely benign (maternal)
likely benign (paternal)
benign
benign (dominant)
benign (recessive)
benign (!)
benign (maternal)
benign (paternal)
conflicting
association
NA
DNA change (genomic) (hg19)
: HGVS description of variant at DNA level, based on the genomic (chromosomal) DNA reference sequence; e.g. g.12345678C>T, g.12345679del, g.12345678_12345890dup
DNA change (hg38)
: HGVS description of variant at DNA level, based on the hg38 genomic (chromosomal) eference sequence; e.g. g.12345678C>T, g.12345679del, g.12345678_12345890dup
Published as
: listed only when different from "DNA change"; variant as reported originally (e.g. 521delT). Variants seen in animal models, tested in vitro, predicted from RNA analysis, etc. are described between brackets like c.(456C>G)
ISCN
: description of the variant according to ISCN nomenclature
DB-ID
: database ID of variant, grouping multiple observations of the same variant together, starting with the HGNC gene symbol, followed by an underscore (_) and a six digit number (e.g. DMD_012345). _000000 is used for variants where DNA was not analysed (change predicted from RNA analysis), variants seen in animal models or variants not seen in humans but functionally tested in vitro
Variant remarks
: remarks regarding variant described, e.g. germline mosaicism in mother, 345 kb deletion, muscle RNA analysed, not in 200 control chromosomes tested, on founder haplotype, etc.
Reference
: publication describing the variant submitted, incl. links to OMIM, PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
ClinVar ID
: ID of variant in ClinVar database
dbSNP ID
: the dbSNP ID
Origin
: Origin of variant/record: Germline = in all cells, De novo = in all cells, but not in either parent, Germline/De novo (untested) = in all cells, parents not tested (use only when De novo is likely, e.g. isolated/sporadic cases with dominant disease), Somatic = present in a subset of cells, but not in either parent, Uniparental disomy = from parental disomy (maternal or paternal), CLASSIFICATION record = submitter only sharing variant classification (note another report may share Individual data), SUMMARY record = master summary record from curator (may link to another database), In vitro (cloned) = data resulting from in vitro functional assays, animal model = data from animal model, Artefact = false positive variant call, DUPLICATE record = variant already described on another chromosome (e.g. unbalanced translocation, duplicating transposition, 2nd fusion transcript, etc.)
All options:
Germline
De novo
Germline/De novo (untested)
Somatic
Uniparental disomy
Uniparental disomy, maternal allele
Uniparental disomy, paternal allele
CLASSIFICATION record
SUMMARY record
In vitro (cloned)
In silico
animal model
Artefact
DUPLICATE record
Unknown
Not applicable
Segregation
: Indicates whether the variant segregates with the phenotype (yes), does not segregate with the phenotype (no) or segregation is unknown (?)
All options:
? = unknown
yes = segregates with phenotype
no = does not segregate with phenotype
- = not applicable
Frequency
: frequency in which the variant was found; e.g 5/760 chromosomes (in 5 of 760 chromosomes tested), 1/33 patients (in 1 of 33 patients analysed in study), 0.05 controls (in 5% of control cases tested)
Re-site
: restriction enzyme recognition site created (+) or destroyed (-); e.g. BglII+;BamHI-
VIP
: variant VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Methylation
: result of methylation test; GOM (gain of methylation), LOM (loss of methylation), 30% (30% methylated). NOTE: when several tests were done mention the method as well (e.g. MS-PCR 75%)
Template
: Template(s) used to detect the sequence variant; DNA (genomic DNA), RNA (cDNA) or protein
All options:
DNA
RNA = RNA (cDNA)
protein
? = unknown
Technique
: technique(s) used to identify the sequence variant.
All options:
? = unknown
ARMS = amplification refractory mutation system
arrayCGH = array for Comparative Genomic Hybridisation
arrayMET = array for methylation analysis
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
ASO = allele-specific oligo hybridisation
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
COBRA = Combined Bisulfite Restriction Analysis
CSCE = Conformation Sensitive Capillary Electrophoresis
CSGE = Conformation Sensitive Gel Electrophoresis
ddF = dideoxy Fingerprinting
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
DSCA = Double-Strand DNA Conformation Analysis
DSDI = Detection Small Deletions and Insertions
EMC = Enzymatic Mismatch Cleavage
expr = expression analysis
FISH = Fluorescent In-Situ Hybridisation
FISHf = fiberFISH
HD = HeteroDuplex analysis
HPLC = High-Performance Liquid Chromatography
IEF = IsoElectric Focussing
IHC = Immuno-Histo-Chemistry
Invader = Invader assay
MAPH = Multiplex Amplifiable Probe Hybridisation
MAQ = Multiplex Amplicon Quantification
MCA = Melting Curve Analysis, high-resolution (HRMA)
microscope = microscopic analysis (karyotype)
microsat = microsatellite genotyping
minigene = expression minigene construct
MIP = Molecular Inversion Probe amplification
MIPsm = single molecule Molecular Inversion Probe amplification
MLPA = Multiplex Ligation-dependent Probe Amplification
MLPA-ms = Multiplex Ligation-dependent Probe Amplification, methylation specific
MS = mass spectrometry
Northern = Northern blotting
NUC = nuclease digestion (RNAseT1, S1)
OM = optical mapping
PAGE = Poly-Acrylamide Gel-Electrophoresis
PCR = Polymerase Chain Reaction
PCRdd = PCR, digital droplet
PCRdig = PCR + restriction enzyme digestion
PCRh = PCR, haloplex
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRms = PCR, methylation sensitive
PCRq = PCR, quantitative (qPCR)
PCRrp = PCR, repeat-primed (RP-PCR)
PCRsqd = PCR, semi-quantitative duplex
PE = primer extension (APEX, SNaPshot)
PEms = primer extension, methylation-sensitive single-nucleotide
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
PTT = Protein Truncation Test
RFLP = Restriction Fragment Length Polymorphisms
RT-PCR = Reverse Transcription and PCR
RT-PCRq = Reverse Transcription and PCR, quantitative
SBE = Single Base Extension
SEQ = SEQuencing (Sanger)
SEQb = bisulfite SEQuencing
SEQp = pyroSequencing
SEQms = sequencing, methylation specific
SEQ-ON = next-generation sequencing - Oxford Nanopore
SEQ-NG = next-generation sequencing
SEQ-NG-RNA = next-generation sequencing RNA
SEQ-NG-H = next-generation sequencing - Helicos
SEQ-NG-I = next-generation sequencing - Illumina/Solexa
SEQ-NG-IT = next-generation sequencing - Ion Torrent
SEQ-NG-R = next-generation sequencing - Roche/454
SEQ-NG-S = next-generation sequencing - SOLiD
SEQ-PB = next-generation sequencing - Pacific Biosciences
SNPlex = SNPlex
Southern = Southern blotting
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = fluorescent SSCA (SSCP)
STR = Short Tandem Repeat
TaqMan = TaqMan assay
Western = Western blotting
- = not applicable
Tissue
: tissue type used for analysis
Remarks
: remarks regarding the screening like WGS (whole genome sequencing), WES (whole exome sequencing, gene panel (incl. a list of genes analysed), etc.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
65 entries on 1 page. Showing entries 1 - 65.
10 per page
25 per page
50 per page
100 per page
Legend
How to query
Effect
Exon
DNA change (cDNA)
RNA change
Protein
P-domain
Allele
Classification method
Clinical classification
DNA change (genomic) (hg19)
DNA change (hg38)
Published as
ISCN
DB-ID
Variant remarks
Reference
ClinVar ID
dbSNP ID
Origin
Segregation
Frequency
Re-site
VIP
Methylation
Template
Technique
Tissue
Remarks
Disease
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Panel size
Owner
+/.
-
c.1437_1439del
r.(?)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
MUTYH(NM_001048171.1):c.1395_1397del (p.(Glu466del)), MUTYH(NM_001128425.2):c.1437_1439delGGA (p.E480del)
-
MUTYH_000086
VKGL data sharing initiative Nederland
-
-
-
CLASSIFICATION record
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1437_1439del, 1434_1436del (Glu466del)
-
MUTYH_000086
-
DUPLICATE – to be removed
-
-
Germline
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Eliason 2005
-
-
Unknown
-
1/219 APC neg FAP patients; 0/306 MLH1 and MSH2 neg HNPCC patients
-
-
-
DNA
SEQ
-
-
cancer, colon
-
PubMed: Eliason 2005
-
-
-
United States
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Eliason 2005
-
-
Unknown
-
1/219 APC neg FAP patients; 0/306 MLH1 and MSH2 neg HNPCC patients
-
-
-
DNA
SEQ
-
-
cancer, colon
-
PubMed: Eliason 2005
-
-
-
United States
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Eliason 2005
-
-
Unknown
-
1/219 APC neg FAP patients; 0/306 MLH1 and MSH2 neg HNPCC patients
-
-
-
DNA
SEQ
-
-
cancer, colon
-
PubMed: Eliason 2005
-
-
-
United States
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Gismondi 2004
-
-
Unknown
-
1/38 (3%) APC neg FAP patients; 0/31 APC neg. AFAP patients; 0/141 population based polyposis patients; 0/52 controls
-
-
-
DNA
PCRdig, SEQ
-
-
cancer, colon
-
PubMed: Gismondi 2004
-
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Gismondi 2004
-
-
Unknown
-
2/38 (5%) APC neg FAP patients; 0/31 APC neg. AFAP patients; 0/141 population based polyposis patients; 0/52 controls
-
-
-
DNA
PCRdig, SEQ
-
-
cancer, colon
-
PubMed: Gismondi 2004
-
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Gismondi 2004
-
-
Unknown
-
2/38 (5%) APC neg FAP patients; 0/31 APC neg. AFAP patients; 0/141 population based polyposis patients; 0/52 controls
-
-
-
DNA
PCRdig, SEQ
-
-
cancer, colon
-
PubMed: Gismondi 2004
-
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Aceto 2005
-
-
Unknown
-
1/29 (3.4%) APC mutation negative (A)FAP patients; 0/79 controls
-
-
-
DNA
DHPLC, SEQ
-
-
cancer, colon
-
PubMed: Aceto 2005
-
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Gismondi 2004
-
-
Unknown
-
2/31 (6%) APC neg AFAP patients; 0/38 APC neg FAP patients; 0/141 population based polyposis patients; 0/52 controls
-
-
-
DNA
PCRdig, SEQ
-
-
cancer, colon
-
PubMed: Gismondi 2004
-
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Gismondi 2004
-
-
Unknown
-
2/31 (6%) APC neg. AFAP patients; 0/38 APC neg FAP patients; 0/141 population based polyposis patients; , 0/52 controls
-
-
-
DNA
PCRdig, SEQ
-
-
cancer, colon
-
PubMed: Gismondi 2004
-
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Gismondi 2004
-
-
Unknown
-
1/31 (3%) APC neg. AFAP patients; 0/38 APC neg FAP patients; 0/141 population based polyposis patients; 0/52 controls
-
-
-
DNA
PCRdig, SEQ
-
-
cancer, colon
-
PubMed: Gismondi 2004
-
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
;
PubMed: Vogt 2009
-
-
Germline
-
8/658
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
PubMed: Aretz 2006
,
PubMed: Vogt 2009
-
F
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Lipton 2003
-
-
Unknown
-
-
-
-
-
DNA
SEQ
-
-
?
PMID14633673_3
PubMed: Lipton 2003
-
-
-
(Denmark);(Finland);(Switzerland);(United Kingdom (Great Britain))
-
-
-
-
-
1
Carli Tops
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Gismondi 2004
-
-
Unknown
-
-
-
-
-
DNA
SEQ
-
-
?
PMID14999774_1
PubMed: Gismondi 2004
-
-
-
-
-
-
-
-
-
1
Carli Tops
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Piccioli 2006
-
-
Unknown
-
-
-
-
-
DNA
SEQ
-
-
?
PMID16455870_1
PubMed: Piccioli 2006
-
-
-
Italy
-
-
-
-
-
1
Carli Tops
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Both (homozygous)
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Vogt 2009
; Clinical Genetics, LUMC, Leiden, NL
-
-
Germline
-
-
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
PubMed: Vogt 2009
; Clinical Genetics, LUMC, Leiden, NL
-
M
-
Turkey
-
-
-
-
-
1
Carli Tops
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
PubMed: Olschwang 2007
-
-
Unknown
-
-
-
-
-
DNA
SEQ
-
-
CRC
-
PubMed: Olschwang 2007
No info 2nd allele; Among 406 patients with >5 polyps and/or CRC in France
-
-
Italy
-
-
-
-
-
3
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del; 1395-7 delGGA (Glu466del)
-
MUTYH_000086
-
PubMed: Halford 2003
-
-
Unknown
-
-
-
-
-
DNA
SEQ
-
-
?
-
PubMed: Halford 2003
53y right-sided, moderately differentiated, Dukes B cancer, no reported family history of colorectal tumors, multiple small adenomas synchronous with the carcinoma.
-
-
(United Kingdom (Great Britain))
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del; 1392delGGA (Glu465del)
-
MUTYH_000086
-
MGZ, Munchen, DE
-
-
Unknown
-
-
-
-
-
DNA
SEQ
-
-
?
-
MGZ, Munchen, Germany
no known clinic, sample received from cooperating lab
-
-
(Germany)
-
-
-
-
-
1
Elke Holinski-Feder
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del); (Glu466fs)
-
MUTYH_000086
-
PubMed: Filipe 2009
-
-
Germline
-
-
-
-
-
DNA
SSCA, SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
PubMed: Filipe 2009
39/48 FAP patients (>100 adenomas): APC mutation; 3/9 (33%) of APC negative FAP patients: MUTYH mutations
-
-
Portugal
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del); Glu466del
-
MUTYH_000086
In adenomas, carcinomas and surrounding normal mucosa: IHC MUTYH: strong granular cytoplasmic staining without any nuclear expression (in patients without MUTYH mutations nuclear and cytoplasmatic stainting); strong granular cytoplasmic staining without any nuclear expression (= aberrant staining pattern)
PubMed: Di Gregorio 2006
-
-
Germline
-
-
-
-
-
DNA
IHC, SEQ
leukocyte
SEQ (ex1-16), screen MUTYH gene (index)
CRC
16890597_3
PubMed: Di Gregorio 2006
IHC study of 20 tumor samples from 18 biallelic MUTYH carriers
M
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #2
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del); Glu466del
-
MUTYH_000086
In adenomas, carcinomas and surrounding normal mucosa: IHC MUTYH: strong granular cytoplasmic staining without any nuclear expression (in patients without MUTYH mutations nuclear and cytoplasmatic stainting); strong granular cytoplasmic staining without any nuclear expression (= aberrant staining pattern)
PubMed: Di Gregorio 2006
-
-
Germline
-
-
-
-
-
DNA
IHC, SEQ
leukocyte
SEQ (ex1-16), screen MUTYH gene (index)
CRC
16890597_3
PubMed: Di Gregorio 2006
IHC study of 20 tumor samples from 18 biallelic MUTYH carriers
M
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del); delGGA464
-
MUTYH_000086
-
PubMed: Ponti 2007
-
-
Germline
-
-
-
-
-
DNA
SEQ
leukocyte
SEQ (ex1-16), screen MUTYH gene (index)
?
17273161_fam_3_1
PubMed: Ponti 2007
Attenuated colonic polyposis
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395delGGA (exon 14)
-
MUTYH_000086
-
PubMed: Cattaneo 2008
-
-
Unknown
-
0/1290
-
-
-
DNA
PCRdig
leukocyte
test known variant (645 controls)
?
-
PubMed: Cattaneo 2008
645 healty controls
-
-
Greece;Italy
-
-
-
-
-
-
Carli Tops
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
Unknown
-
5/230
-
-
-
DNA
SEQ
leukocyte
-
?
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
-
Turkey
-
-
-
-
-
1
Mette Gaustadnes
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #2
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
Unknown
-
5/230
-
-
-
DNA
SEQ
leukocyte
-
?
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
-
Turkey
-
-
-
-
-
1
Mette Gaustadnes
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
Unknown
-
5/230
-
-
-
DNA
SEQ
leukocyte
-
?
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
-
Turkey
-
-
-
-
-
1
Mette Gaustadnes
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del); Glu466del
-
MUTYH_000086
In adenomas, carcinomas and surrounding normal mucosa: IHC MUTYH: strong granular cytoplasmic staining without any nuclear expression (in patients without MUTYH mutations nuclear and cytoplasmatic stainting); strong granular cytoplasmic staining without any nuclear expression (= aberrant staining pattern)
PubMed: Di Gregorio 2006
-
-
Germline
-
-
-
-
-
DNA
IHC, SEQ
leukocyte
SEQ (ex1-16), screen MUTYH gene (index)
?
16890597_4
PubMed: Di Gregorio 2006
IHC study of 20 tumor samples from 18 biallelic MUTYH carriers
M
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del); Glu466del
-
MUTYH_000086
In adenomas, carcinomas and surrounding normal mucosa: IHC MUTYH: strong granular cytoplasmic staining without any nuclear expression (in patients without MUTYH mutations nuclear and cytoplasmatic stainting); strong granular cytoplasmic staining without any nuclear expression (= aberrant staining pattern)
PubMed: Di Gregorio 2006
-
-
Germline
-
-
-
-
-
DNA
IHC, SEQ
leukocyte
SEQ (ex1-16), screen MUTYH gene (index)
CRC
16890597_7
PubMed: Di Gregorio 2006
IHC study of 20 tumor samples from 18 biallelic MUTYH carriers
M
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del); Glu466del
-
MUTYH_000086
In adenomas, carcinomas and surrounding normal mucosa: IHC MUTYH: strong granular cytoplasmic staining without any nuclear expression (in patients without MUTYH mutations nuclear and cytoplasmatic stainting); strong granular cytoplasmic staining without any nuclear expression (= aberrant staining pattern)
PubMed: Di Gregorio 2006
-
-
Germline
-
-
-
-
-
DNA
IHC, SEQ
leukocyte
SEQ (ex1-16), screen MUTYH gene (index)
?
16890597_9
PubMed: Di Gregorio 2006
IHC study of 20 tumor samples from 18 biallelic MUTYH carriers
M
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #2
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del); Glu466del
-
MUTYH_000086
In adenomas, carcinomas and surrounding normal mucosa: IHC MUTYH: strong granular cytoplasmic staining without any nuclear expression (in patients without MUTYH mutations nuclear and cytoplasmatic stainting); strong granular cytoplasmic staining without any nuclear expression (= aberrant staining pattern)
PubMed: Di Gregorio 2006
-
-
Germline
-
-
-
-
-
DNA
IHC, SEQ
leukocyte
SEQ (ex1-16), screen MUTYH gene (index)
?
16890597_9
PubMed: Di Gregorio 2006
IHC study of 20 tumor samples from 18 biallelic MUTYH carriers
M
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del)
-
MUTYH_000086
Frequency in 62 probands New York, 13 Milan, 5 Madrid
PubMed: Peterlongo 2006
-
-
Unknown
-
1/160 alleles
-
-
-
DNA
SEQ
leukocyte
SEQ (ex1-16), screen MUTYH gene (index)
CRC
-
PubMed: Peterlongo 2006
137 patients below 21 polyps / CRC; fam above 2 CRCs; 63 NY; 38 Madrid; 36 Milan; 80: SEQ ex1-16 (62+5+13); 57: test Y179C/G396D/480delE; 6/137 +/-, 3 +/+; NY non-Jewish: 2/40 +/-, 1/40 +/+; NY Jewish: 0/23; MD: 3/38 +/-; MI: 1/36 +/-, 2/36 +/+
-
-
Italy
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #2
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
Unknown
-
5/230
-
-
-
DNA
SEQ
leukocyte
-
polyposis
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
-
Turkey
-
-
-
-
-
1
Mette Gaustadnes
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
Unknown
-
5/230
-
-
-
DNA
SEQ
leukocyte
-
polyposis
-
Molecular Medicine, AUH, Skejby, Aarhus, DK
-
-
-
Turkey
-
-
-
-
-
1
Mette Gaustadnes
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Both (homozygous)
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
-
-
MUTYH_000086
-
Redeker (unpublished); AMC, Amsterdam, NL
-
-
Germline
-
-
-
-
-
DNA
SEQ
-
-
CRC
-
Redeker (unpublished); AMC, Amsterdam, NL
-
M
-
Iran
-
-
-
-
-
1
Bert Redeker
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Both (homozygous)
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1437_1439del, 1434_1436del (Glu466del)
-
MUTYH_000086
-
Clinical Genetics, Karolinska University Hospital, Stockholm, SE
-
-
Unknown
-
-
-
-
-
DNA
SEQ
-
-
polyposis
-
Clinical Genetics, Karolinska University Hospital, Stockholm, SE
-
M
-
(Sweden)
-
-
-
-
-
1
Kristina Lagerstedt Robinson
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #2
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
Molecular Diagnostics, NSCR Demokritos, Athens, GR
-
-
Germline
-
-
-
-
-
DNA, RNA
PCR, RT-PCR, SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
Molecular Diagnostics, NSCR Demokritos, Athens, GR
-
M
-
Greece
Greek
-
-
-
-
1
Florentia Fostira
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del (Glu466del)
-
MUTYH_000086
-
Molecular Diagnostics, NSCR Demokritos, Athens, GR
-
-
Germline
-
-
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
?
-
Molecular Diagnostics, NSCR Demokritos, Athens, GR
-
M
-
Greece
-
-
-
-
-
1
Florentia Fostira
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
;
PubMed: Vogt 2009
-
-
Germline
-
8/658
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
PubMed: Aretz 2006
,
PubMed: Vogt 2009
-
F
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
;
PubMed: Vogt 2009
-
-
Germline
-
-
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (part?) (relative)
CRC
-
PubMed: Aretz 2006
,
PubMed: Vogt 2009
-
F
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
;
PubMed: Vogt 2009
-
-
Germline
-
-
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (part?) (relative)
?
-
PubMed: Aretz 2006
,
PubMed: Vogt 2009
-
F
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
-
-
Germline
-
8/658
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
PubMed: Aretz 2006
-
-
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
-
-
Germline
-
8/658
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
?
-
PubMed: Aretz 2006
-
-
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
;
PubMed: Vogt 2009
-
-
Germline
-
8/658
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
PubMed: Aretz 2006
,
PubMed: Vogt 2009
-
F
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
-
-
Germline
-
8/658
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
?
-
PubMed: Aretz 2006
-
-
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #2
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
-
-
Germline
-
8/658
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
?
-
PubMed: Aretz 2006
-
-
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Aretz 2006
-
-
Germline
-
8/658
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
?
-
PubMed: Aretz 2006
-
-
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #1
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Vogt 2009
-
-
Germline
-
-
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
PubMed: Vogt 2009
-
M
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Parent #2
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA; 1437_1499delGGA (Glu466del); Glu466del
-
MUTYH_000086
-
PubMed: Vogt 2009
-
-
Germline
-
-
-
-
-
DNA
SEQ
leukocyte
screen MUTYH gene (index)
CRC
-
PubMed: Vogt 2009
-
M
-
(Germany)
-
-
-
-
-
1
Stefan Aretz
+/.
14
c.1437_1439del
r.(1437_1439del)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397del; 1395delGGA (Glu466del)
-
MUTYH_000086
-
PubMed: Colebatch 2006
-
-
Germline
-
1/1744 (0,06%)
-
-
-
DNA
SEQ
leukocyte
specific genotyping, screen MUTYH gene (index)
CRC
17031395_patient_13714
PubMed: Colebatch 2006
872 CRC patients: 2 (0.2%) biallelic carrier; 11 (1.3%) monoallelic; 478 controls: 5 (1.0%) monoallelic
M
-
Australia
-
-
-
-
-
1
Astrid Out
+/.
14
c.1437_1439del
r.(?)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
1395_1397delGGA (Glu466del)
-
MUTYH_000086
-
Spier and Aretz (unpublished)
-
-
Unknown
-
-
-
-
-
DNA, RNA
RT-PCR, SEQ
leukocyte
-
polyposis
-
Spier and Aretz (unpublished)
-
F
-
Bulgaria
-
-
-
-
-
1
Carli Tops
+/.
-
c.1437_1439del
r.(?)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
-
-
MUTYH_000086
-
PubMed: Baert-Desurmont 2018
-
-
Germline
-
-
-
-
-
DNA
?
-
-
FAP
-
PubMed: Baert-Desurmont 2018
-
-
-
France
-
-
-
-
-
1
Stephanie Baert-Desurmont
+/.
-
c.1437_1439del
r.(?)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
-
-
MUTYH_000086
-
PubMed: Baert-Desurmont 2018
-
-
Germline
-
-
-
-
-
DNA
?
-
-
CRC
-
PubMed: Baert-Desurmont 2018
-
-
-
France
-
-
-
-
-
1
Stephanie Baert-Desurmont
+?/.
14
c.1437_1439del
r.(?)
p.Glu480del
MutT-like domain
Unknown
-
NA
g.45796895_45796897del
g.45331223_45331225del
19953527_1437_1439_MEF
-
MUTYH_000086
In vivo complementation assay; Mutant MUTYH expression and function in MUTYH null mouse embryonic fibroblasts; Lower protein expression compared to wild-type and much less 8-oxodG repair; in nucleus of proliferating cells (like WT); Expression from transfected plasmid with site-directed mutated human MutYgamma3 cDNA (RefSeq: NM_001048173.1)
PubMed: Molatore 2009
-
-
In vitro (cloned)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+/.
14
c.1437_1439del
r.(?)
p.Glu480del
-
Unknown
-
NA
g.45796895_45796897del
g.45331223_45331225del
20848659_452delE
-
MUTYH_000086
in vitro test of the DNA glycosylase activity on adenine mispaired with 8-hydroxyguanine; extremely severely defective
PubMed: Goto 2010
-
-
In vitro (cloned)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+?/.
14
c.1437_1439del
r.(?)
p.Glu480del
MutT-like domain
Unknown
-
NA
g.45796895_45796897del
g.45331223_45331225del
19953527_1437_1439_vitro
-
MUTYH_000086
In vitro functional assay; In vitro glycosylase activity of mutant MUTYH (fusion-protein) on an 8-oxodG:A containing DNA substrate; Devoid of detectable glycosylase activity
PubMed: Molatore 2009
-
-
In vitro (cloned)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+?/.
14
c.1437_1439del
r.(?)
p.Glu480del
-
Unknown
-
NA
g.45796895_45796897del
g.45331223_45331225del
20418187_c1437_1439_glycosylase
-
MUTYH_000086
In vitro glycosylase assay; Expression human proteins, bacteria, glycosylase assay 8-oxoG:A; Surface plasmon resonance (SPR) real-time recording association/dissociation; glycosylase activity totally abrogated
PubMed: D Agostino 2010
-
-
In vitro (cloned)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+?/.
14
c.1437_1439del
r.(?)
p.Glu480del
MutT-like domain
Unknown
-
NA
g.45796895_45796897del
g.45331223_45331225del
19953527_1437_1439_survival
-
MUTYH_000086
In vivo cell survival assay; Cell survival after induced oxidative stress; hypersensitivity to toxic agent effect and decreased survival capability compared to WT
PubMed: Molatore 2009
-
-
In vitro (cloned)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+?/.
14
c.1437_1439del
r.(?)
p.Glu480del
-
Unknown
-
NA
g.45796895_45796897del
g.45331223_45331225del
20418187_c1437_1439_binding
-
MUTYH_000086
In vitro DNA binding assay; Expression human proteins, bacteria, glycosylase assay 8-oxoG:A; Surface plasmon resonance (SPR) real-time recording association/dissociation; severe reduction in the binding affinity
PubMed: D Agostino 2010
-
-
In vitro (cloned)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+/.
-
c.1437_1439del
r.(?)
p.Glu480del
-
Unknown
ACMG
pathogenic
g.45796895_45796897del
g.45331223_45331225del
-
-
MUTYH_000086
patient with pathogenic WT1 variant:: nephroblastoma at age of 6 month, 2 brothers of the grandfather ms tumors at age 35 y. and 50y (unknown tumors), sister of grandfahter BC; reported in Halford 2003. Am J Pathol 162: 1545; Vogt 2009. Gastroenterology 137: 1976; Goto 2010. Hum Mutat 31: 1861
-
-
rs587778541
Germline
-
-
-
-
-
DNA
SEQ-NG-S
-
-
-
-
-
-
M
-
-
-
-
-
-
-
1
Andreas Laner
+/.
-
c.1437_1439del
r.(?)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
g.45331223_45331225del
MUTYH(NM_001048171.1):c.1395_1397del (p.(Glu466del)), MUTYH(NM_001128425.2):c.1437_1439delGGA (p.E480del)
-
MUTYH_000086
VKGL data sharing initiative Nederland
-
-
-
CLASSIFICATION record
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+/.
-
c.1437_1439del
r.(?)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
-
MUTYH(NM_001048171.1):c.1395_1397del (p.(Glu466del)), MUTYH(NM_001128425.2):c.1437_1439delGGA (p.E480del)
-
MUTYH_000086
VKGL data sharing initiative Nederland
-
-
-
CLASSIFICATION record
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+/.
-
c.1437_1439del
r.(?)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
-
MUTYH(NM_001048171.1):c.1395_1397del (p.(Glu466del)), MUTYH(NM_001128425.2):c.1437_1439delGGA (p.E480del)
-
MUTYH_000086
VKGL data sharing initiative Nederland
-
-
-
CLASSIFICATION record
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+/.
-
c.1437_1439del
r.(?)
p.(Glu480del)
-
Unknown
-
pathogenic
g.45796895_45796897del
-
MUTYH(NM_001048171.1):c.1395_1397del (p.(Glu466del)), MUTYH(NM_001128425.2):c.1437_1439delGGA (p.E480del)
-
MUTYH_000086
VKGL data sharing initiative Nederland
-
-
-
CLASSIFICATION record
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
10 per page
25 per page
50 per page
100 per page
Legend
How to query
Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our
APIs
to retrieve data.
Powered by
LOVD v.3.0
Build 30b
LOVD software ©2004-2024
Leiden University Medical Center
Database contents © by their respective submitters and curators