Full data view for gene PTPN11

Information The variants shown are described using the NM_002834.3 transcript reference sequence.

10 entries on 1 page. Showing entries 1 - 10.
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Effect     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

AscendingDNA change (cDNA)     

RNA change     

Protein     

P-domain     

Enzyme activity     

mRNA level     

Protein level     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

Country     

Population     

Age at death     

VIP     

Data_av     

Treatment     

Panel size     

Owner     
?/? - DNA substitution (VariO:0136);transition (VariO:0313);purine transition (VariO:0315) amino acid substitution (VariO:0021) RNA substitution (VariO:0312);transition (VariO:0313);purine transition (VariO:0315);missense variation (VariO:0308) - c.922A>G r.(922a>g) p.(Asn308Asp) - - - - Parent #1 - VUS g.112915523A>G g.112477719A>G - - PTPN11_000047 - PubMed: Siegfried 2017 - - Germline ? - - - - DNA SEQ - - NS - PubMed: Siegfried 2017 - M ? (France) - - - - - 1 Gerard C.P. Schaafsma
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown ACMG pathogenic (dominant) g.112915523A>G g.112477719A>G - - PTPN11_000047 ACMG PS2_VS, PS3, PM5, PP1_S, PP3 PubMed: Kim 2022, Journal: Kim 2022 - - De novo - - - - - DNA SEQ-NG-I - - DFNA SH324-721 PubMed: Kim 2022, Journal: Kim 2022 - - - Korea, South (Republic) - - - - - 1 So Young Kim
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown - pathogenic g.112915523A>G - PTPN11(NM_002834.3):c.922A>G (p.N308D, p.(Asn308Asp)), PTPN11(NM_002834.5):c.922A>G (p.N308D) - PTPN11_000047 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown - pathogenic g.112915523A>G - PTPN11(NM_002834.3):c.922A>G (p.N308D, p.(Asn308Asp)), PTPN11(NM_002834.5):c.922A>G (p.N308D) - PTPN11_000047 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown - pathogenic g.112915523A>G - - - PTPN11_000047 - - - rs28933386 CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown ACMG pathogenic (dominant) g.112915523A>G g.112477719A>G - - PTPN11_000047 ACMG PS3, PM1, PM2, PM5, PP2, PP3, PP4, PP5 PubMed: Marinakis 2021 - rs28933386 Germline/De novo (untested) - - - - - DNA SEQ, SEQ-NG - WES ? 8112 PubMed: Marinakis 2021 - M - Greece - - - - - 1 Jan Traeger-Synodinos
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown ACMG pathogenic (dominant) g.112915523A>G g.112477719A>G - - PTPN11_000047 ACMG PM1, PM2, PM5, PP2, PP3, PP5 PubMed: Marinakis 2021 - rs28933386 Germline/De novo (untested) - - - - - DNA SEQ, SEQ-NG - WES ? 9138 PubMed: Marinakis 2021 - F - Greece - - - - - 1 Jan Traeger-Synodinos
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown - pathogenic g.112915523A>G - PTPN11(NM_002834.3):c.922A>G (p.N308D, p.(Asn308Asp)), PTPN11(NM_002834.5):c.922A>G (p.N308D) - PTPN11_000047 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown - pathogenic (dominant) g.112915523A>G g.112477719A>G ref?:c.922A>G - PTPN11_000047 - PubMed: Soden 2014 - - De novo - - - - - DNA SEQ, SEQ-NG - - ? CMH545 PubMed: Soden 2014 family, 1 affected - - United States - - - - - 1 Johan den Dunnen
+/. - - - - - c.922A>G r.(?) p.(Asn308Asp) - - - - Unknown - pathogenic g.112915523A>G g.112477719A>G - - PTPN11_000047 variants reported seperately, unknown if mono-allelic or bi-allelic PubMed: Retterer 2016 - - Unknown - - - - - DNA SEQ, SEQ-NG - WES ? - PubMed: Retterer 2016 analysis proband (1/3040); possible combination of variants not reported - - United States - - - - - 1 Johan den Dunnen
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