Full data view for gene SHOX

Information The variants shown are described using the transcript reference sequence.

10 entries on 1 page. Showing entries 1 - 10.
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Effect     

Function/GVS     

Exon     

AscendingDNA change (cDNA)     

RNA change     

Protein     

P-domain     

Predict-BioInf     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

Country     

Population     

Age at death     

VIP     

Data_av     

Treatment     

Panel size     

Owner     
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Maternal (confirmed) - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 0/14 control alleles; no dimerization, no DNA binding PubMed: Binder 2004 - rs137852557 Germline - 1/20 cases +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA SEQ - - LWD - PubMed: Schneider 2005 inheritance familial, found in affected mother - - Germany white - - - - 2 Ralph Roeth
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Unknown - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 0/558 control alleles; no dimerization, no DNA binding PubMed: Schneider 2005 - rs137852557 Germline - 1/1928 patients +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA DHPLC, SEQ - - ISS - PubMed: Schneider 2005 - - - Turkey white - - - - 1 Ralph Roeth
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Unknown - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 no dimerization, no DNA binding PubMed: Fukami 2004 - rs137852557 Germline - 3/31 patients +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA SEQ - - ISS - PubMed: Schneider 2005 inheritance familial, found in 3 affectes - - Japan Asian - - - - 3 Ralph Roeth
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Unknown - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 no dimerization, no DNA binding Esoterix, unpublished - rs137852557 Germline - 3/5729 patients +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA DHPLC, SEQ - - ISS - PubMed: Schneider 2005 - - - United States - - - - - 3 Ralph Roeth
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Unknown - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 no dimerization, no DNA binding PubMed: Huber 2006 - rs137852557 Germline - 1/54 patients +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA SEQ - - LWD - PubMed: Schneider 2005 - - - France white - - - - 1 Ralph Roeth
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Unknown - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 0/942 control alleles; no dimerization, no DNA binding PubMed: Bunyan 2013 - rs137852557 Germline - 2/36 patients +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA SEQ - - LWD - PubMed: Schneider 2005 - - - United Kingdom (Great Britain) white - - - - 2 Ralph Roeth
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Maternal (confirmed) - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 no dimerization, no DNA binding PubMed: Ogata 2002, OMIM:var0008 - rs137852557 Germline - - +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA FISH - - LMD - PubMed: Schneider 2005 3-generation family, affected child (SHOX nullizygosity) M no Japan - - - - - 1 Johan den Dunnen
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Maternal (confirmed) - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 no dimerization, no DNA binding PubMed: Ogata 2002, OMIM:var0008 - rs137852557 Germline - - +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA SEQ - - ISS - PubMed: Schneider 2005 3-generation family, affected sister F no Japan - - - - - 1 Johan den Dunnen
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Parent #2 - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 no dimerization, no DNA binding PubMed: Ogata 2002, OMIM:var0008 - rs137852557 Germline - - +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA SEQ - - LWD - PubMed: Schneider 2005 3-generation family, affected mother/maternal grandmother F no Japan - - - - - 2 Johan den Dunnen
+/. - 4 c.502C>T r.(?) p.(Arg168Trp) HD CADD: 30 Unknown - pathogenic g.601571C>T g.640836C>T - - SHOX_000034 no dimerization, no DNA binding PubMed: Hirschfeldova et al. 2017 - rs137852557 Unknown - ?/168 patients +BpmI;+BsrI;-BsaWI;-HpaII;-MspI - - DNA SEQ - - - - PubMed: Hirschfeldova 2017 - - - Czech Republic - - - - - 1 Ralph Roeth
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