Full data view for gene SHOX

Information The variants shown are described using the transcript reference sequence.

5 entries on 1 page. Showing entries 1 - 5.
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Effect     

Function/GVS     

Exon     

AscendingDNA change (cDNA)     

RNA change     

Protein     

P-domain     

Predict-BioInf     

Allele     

Classification method     

Clinical classification     

DNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Template     

Technique     

Tissue     

Remarks     

Disease     

ID_report     

Reference     

Remarks     

Gender     

Consanguinity     

Country     

Population     

Age at death     

VIP     

Data_av     

Treatment     

Panel size     

Owner     
+/. - 4 c.508G>C r.(?) p.(Ala170Pro) HD CADD: 25 Unknown - pathogenic g.601577G>C g.640842G>C - - SHOX_000036 0/558 control alleles; no nuclear localization, no dimerization, no DNA binding PubMed: Sabherwal 2004 - - Germline yes 2/1928 patients +BcoDI;+BsaI;+BsmAI;-CviKI_1 - - DNA DHPLC, SEQ - - LWD - PubMed: Sabherwal 2004 PubMed: Schneider 2005 5-generation family, 11 affecteds (7F, 4M) with LWD and 4 affecteds (3F, 1M) with LD - yes Spain white - - - - 15 Ralph Roeth
+/. - 4 c.508G>C r.(?) p.(Ala170Pro) HD CADD: 25 Unknown - pathogenic g.601577G>C g.640842G>C - - SHOX_000036 0/558 control alleles; no nuclear localization, no dimerization, no DNA binding PubMed: Rappold 2007 - - Germline - 1/1608 patients +BcoDI;+BsaI;+BsmAI;-CviKI_1 - - DNA DHPLC, SEQ - - ISS - PubMed: Sabherwal 2004 PubMed: Schneider 2005 - - - Spain white - - - - 1 Ralph Roeth
+/. - 4 c.508G>C r.(?) p.(Ala170Pro) HD CADD: 25 Unknown - pathogenic g.601577G>C g.640842G>C - - SHOX_000036 no nuclear localization, no dimerization, no DNA binding PubMed: Benito-Sanz 2006 - - Germline - 1/26 patients +BcoDI;+BsaI;+BsmAI;-CviKI_1 - - DNA DHPLC, SEQ - - LWD - PubMed: Sabherwal 2004 PubMed: Schneider 2005 - - - Spain white - - - - 1 Ralph Roeth
+/. - 4 c.508G>C r.(?) p.(Ala170Pro) HD CADD: 25 Unknown - pathogenic g.601577G>C g.640842G>C - - SHOX_000036 no nuclear localization, no dimerization, no DNA binding PubMed: Auger et al. 2016 - - Germline - 4/55 patients +BcoDI;+BsaI;+BsmAI;-CviKI_1 - - DNA SEQ - - LWD - PubMed: Auger 2016 - ? - (France) - - - - - 4 Ralph Roeth
+/. - - c.508G>C r.(?) p.(Ala170Pro) - - Unknown - pathogenic g.601577G>C - SHOX(NM_000451.4):c.508G>C (p.A170P) - SHOX_000036 VKGL data sharing initiative Nederland - - - CLASSIFICATION record - - - - - - - - - - - - - - - - - - - - - - -
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