Global Variome shared LOVD
PGAP3 (post-GPI attachment to proteins 3)
LOVD v.3.0 Build 30b [
Current LOVD status
]
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Curator:
Philippe Campeau
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All individuals with variants in gene PGAP3
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
53 entries on 1 page. Showing entries 1 - 53.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00025462
-
PubMed: Howard 2014
Three siblings, 17,8 and 4y, with hyperphosphatasia with mental retardation 4.
-
yes
Pakistan
Pakistani
-
-
-
-
HPMRS4;GPIBD10
All three children presented profound developmental delay, severe learning disability, no speech, psychomotor delay, postnatal microcephaly, and high levels of serum ALP. 2 over three had generalized tonic-clonic seizures. All had involuntary midline hand movements, and bruxism. Facial features included apparent hypertelorism, Upslanting palpebral fissures, Broad nasal bridge and nasal tip, short nose, Tented upper-lip vermilion, Large, fleshy ear lobes, cleft lip in 2 over 3,
1
1
Philippe Campeau
00025463
-
PubMed: Howard 2014
Index case.
F
no
United States
white
-
-
-
-
HPMRS4;GPIBD10
She presented global development delay, elevated serum ALP levels, and tonic-clonic and cluster seizures. Facial features included apparent hypertelorism, broad nasal bridge and nasal tip, short nose, Tented upper-lip vermilion .
2
1
Philippe Campeau
00025464
-
PubMed: Howard 2014
Index case.
F
yes
Saudi Arabia
-
-
-
-
-
HPMRS4;GPIBD10
She had severe psychomotor delay. Myoclonic seizures started in her second year of life. Physical examination of this 2-year-old female showed normal growth parameters and OFC but axial muscular hypotonia, uncoordinated movements, and facial dysmorphism including hypertelorism, short nose with broad bridge and tip, Tented upper-lip vermilion and Large, fleshy ear lobes. ALP activity was elevated.
1
1
Philippe Campeau
00080958
-
PubMed: Trujillano 2017
unaffected parents
-
-
-
-
-
-
-
-
HPMRS4;GPIBD10
Hyperphosphatasia with mental retardation syndrome 4 (OMIM:615716)
1
1
Daniel Trujillano
00155253
A-II-1
Knaus 2016:27120253
-
F
no
-
European American
-
-
-
-
HPMRS1;GPIBD2
-
2
1
Philippe Campeau
00155254
B-II-2
PubMed: Knaus 2016
-
F
no
-
German
-
-
-
-
HPMRS1;GPIBD2
-
2
1
Philippe Campeau
00155255
C-II-1
PubMed: Knaus 2016
-
M
no
-
French
-
-
-
-
HPMRS1;GPIBD2
-
2
2
Philippe Campeau
00155256
C-II-2
PubMed: Knaus 2016
-
F
no
-
French
-
-
-
-
HPMRS1;GPIBD2
-
2
1
Philippe Campeau
00155267
D-II-2
PubMed: Knaus 2016
-
F
no
-
British
-
-
-
-
HPMRS1;GPIBD2
-
2
1
Philippe Campeau
00155268
E-II-2
PubMed: Knaus 2016
-
F
yes
-
Palestinian
-
-
-
-
HPMRS1;GPIBD2
-
1
2
Philippe Campeau
00155269
E-II-4
PubMed: Knaus 2016
-
F
yes
-
Palestinian
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155270
F-II-3
PubMed: Knaus 2016
-
M
no
-
Japanese
-
-
-
-
HPMRS1;GPIBD2
-
2
1
Philippe Campeau
00155271
Patient_1
PubMed: Abdel-Hamid 2017
-
M
yes
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155272
Patient_2
PubMed: Abdel-Hamid 2017
-
F
yes
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155273
Patient_3
PubMed: Abdel-Hamid 2017
-
F
yes
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155274
Patient_4
PubMed: Abdel-Hamid 2017
-
M
yes
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155275
Patient_5
PubMed: Abdel-Hamid 2017
-
F
yes
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155276
Patient_6
PubMed: Abdel-Hamid 2017
-
F
no
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155277
Patient_7
PubMed: Abdel-Hamid 2017
cousin with Patient_8
M
yes
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
2
Philippe Campeau
00155278
Patient_8
PubMed: Abdel-Hamid 2017
cousin with Patient_7
F
no
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155279
Patient_9
PubMed: Abdel-Hamid 2017
-
M
yes
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
2
Philippe Campeau
00155280
Patient_10
PubMed: Abdel-Hamid 2017
-
M
yes
Egypt
-
-
-
-
-
HPMRS1;GPIBD2
-
1
1
Philippe Campeau
00155283
257982
PubMed: Pagnamenta 2017
-
F
no
-
white
-
-
-
-
DD
-
2
2
Philippe Campeau
00155284
-
PubMed: Pagnamenta 2017
brother of individual 257982
M
no
-
white
-
-
-
-
DD
-
2
1
Philippe Campeau
00155285
IV-1
PubMed: Nampoothiri 2017
-
M
yes
Oman
-
-
-
-
-
DD
-
1
2
Philippe Campeau
00155286
IV-2
PubMed: Nampoothiri 2017
-
F
yes
Oman
-
-
-
-
-
DD, HPMRS6;GPIBD12
-
1
1
Philippe Campeau
00207386
I-1
PubMed: Balobaid et al., 2018
-
F
yes
Saudi Arabia
Middle Eastern
>09y
-
-
anti-epileptic medications
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, seizures, facial dysmorphism, muscular hypotonia, MRI abnormalities (Dandy walker malformation), High ALP levels (703 U/L)
1
1
Philippe Campeau
00207387
VIII-2
PubMed: Balobaid et al., 2018
-
F
yes
Oman
Middle Eastern
>04y
-
-
anti-epileptic medications
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, seizures, Facial dysmorphism, Muscular hypotonia, cleft palate, High ALP levels (>600 U/L)
1
1
Philippe Campeau
00207388
VIII-1
PubMed: Balobaid et al., 2018
-
M
yes
Oman
Middle Eastern
>07y
-
-
anti-epileptic medications
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, seizures, Facial dysmorphism, Muscular hypotonia, MRI abnormalities (cortical dysplasia), cleft palate, High ALP levels (>600 U/L)
1
1
Philippe Campeau
00207389
VII-2
PubMed: Balobaid et al., 2018
-
F
yes
Oman
Middle Eastern
>05y
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Facial dysmorphism, Muscular hypotonia, Other findings (obesity), High ALP levels (>800 U/L)
1
1
Philippe Campeau
00207390
VII-1
PubMed: Balobaid et al., 2018
-
F
yes
Oman
Middle Eastern
>09y
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Facial dysmorphism, Muscular hypotonia, heart abnormalities (multiple atrial septal defect (ASD)), cleft palate, Other findings (abnormal teeth), High ALP levels (>800 U/L)
1
1
Philippe Campeau
00207391
VI-1
PubMed: Balobaid 2018
-
F
no
Qatar
Middle Eastern
>06y
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Facial dysmorphism, Muscular hypotonia, Other findings (laryngomalacia), High ALP levels (1123 U/L)
1
1
Philippe Campeau
00207392
V-1
PubMed: Balobaid 2018
-
F
yes
Qatar
Middle Eastern
>02y03m
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Facial dysmorphism, Muscular hypotonia, skeletal abnormalities (congenital hip dysplasia), opthalmological abnormalities (megalocornea), Heart abnormalities (Small ASD), Cleft palate, High ALP levels (1212 U/L)
1
1
Philippe Campeau
00207393
IV-2
PubMed: Balobaid 2018
-
F
yes
Qatar
Middle Eastern
>10y
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Facial dysmorphism, Muscular hypotonia, MRI abnormalities (Rathke cleft cyst), Cleft palate, Other findings (abnormal teeth), High ALP levels (848 U/L)
1
1
Philippe Campeau
00207394
IV-1
PubMed: Balobaid 2018
-
F
yes
Qatar
Middle Eastern
>13y
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Facial dysmorphism, Muscular hypotonia, MRI abnormalities (hypoplasia of cerebral vermis), skeletal abnormalities (captodactly of 5th finger), Cleft palate, Other findings (abnormal teeth), High ALP levels (848 U/L)
1
1
Philippe Campeau
00207395
III-2
PubMed: Balobaid et al., 2018
-
M
yes
Saudi Arabia
Middle Eastern
>03y
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Facial dysmorphism, Muscular hypotonia, skeletal abnormalities (fractures), Opthalmological abnormalities (megalocornea), Heart abnormalities (repaired arterial septal defect (ASD)), Other findings (hyperpigmented macules of the LT upper thigh, inguinal hernia, abnormal teeth), High ALP levels (1340 U/L)
1
1
Philippe Campeau
00207396
III-1
PubMed: Balobaid et al., 2018
-
F
yes
Saudi Arabia
Middle Eastern
>09y
-
-
anti-epileptic medications
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Seizures (age at onset: 4 years, treatable), Facial dysmorphism, Muscular hypotonia, Opthalmological abnormalities (megalocornea), High ALP levels (1103 U/L)
1
1
Philippe Campeau
00207397
II-2
PubMed: Balobaid et al., 2018
-
M
yes
Saudi Arabia
Middle Eastern
>03y
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Facial dysmorphism, Muscular hypotonia, Opthalmological abnormalities (megalocornea), Otological abnormalities (severe bilateral hearing loss), Cleft palate, High ALP levels (890 U/L)
1
1
Philippe Campeau
00207398
II-1
PubMed: Balobaid et al., 2018
-
M
yes
Saudi Arabia
Middle Eastern
>08y
-
-
anti-epileptic medications
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, Seizure (multifocal epileptic foci from both hemispheres), Facial dysmorphism, Muscular hypotonia, skeletal abnormalities (bilateral coxa valga), Opthalmological abnormalities (megalocornea), cleft palate, Other findings (bilateral inguinal hernia, undescended testes, abnormal teeth), High ALP levels (644 U/L).
1
1
Philippe Campeau
00207399
I-2
PubMed: Balobaid et al., 2018
-
F
yes
Saudi Arabia
Middle Eastern
>06y
-
-
-
HPMRS4;GPIBD10
Severe psychomotor delay, ID, delay speech, behaviour difficulties, facial dysmorphism, muscular hypotonia, MRI abnormalities (Dandy walker malformation), skeletal abnormalities (pectus excavatum, bilateral coxa valga), Otological abnormalities (mild hearing loss), cleft palate, High ALP levels (883.2 U/L)
1
1
Philippe Campeau
00207400
Patient 1
PubMed: Akgün Doğan et al., 2018
Second child of the parents (first cousin marriage), born via cesarean delivery at term. Died due to aspiration pneumonia-related respiratory distress.
M
yes
-
-
00y18m
-
-
-
HPMRS4;GPIBD10
Dysmorphic features (tented thin upper lip, broad nasal bridge, hypertelorism, large fleshy ear lobes, short upturned nose, cleft palate, upslanted palpebral fissures, long philtrum, brachycephaly, large anterior fontanel size), Postnatal microcephaly, Short stature, Neurological abnormalities (global DD, Hypotonia), Brain abnormalities (thin/dysgenetic corpus callosum, mild ventriculomegaly, frontoparietal atrophy), Dysphagia, CVS Anomalies (patent foramen ovale (PFO)), Extremity abnormalities (brittle/hypoplastic nails, thin/sparse hair), Others (inguinal hernia, intestinal malrotation, ear pit nystagmus), ALP levels (672-837 U/L).
1
1
Philippe Campeau
00207401
Patient 2
PubMed: Akgün Doğan et al., 2018
3rd child of parents (first cousin marriage), younger sister of patient 1, born via cesarean delivery at 36 weeks
F
yes
-
-
>00y01m
-
-
-
HPMRS4;GPIBD10
Dysmorphic features (tented thin upper lip, broad nasal bridge, hypertelorism, large fleshy ear lobes, short upturned nose, upslanted palpebral fissures, long philtrum, brachycephaly, large anterior fontanel size, gum hypertrophy), Neurological abnormalities (global DD, Hypotonia), Brain abnormalities (thin/dysgenetic corpus callosum), Dysphagia, CVS Anomalies (patent ductus arteriosus (PDA), concentric ventricle hypertrophy), Extremity abnormalities (pes equinovarus, thin/sparse hair), Others (umbilical hernia, pectus excavatum), ALP levels (756-821 U/L)
1
1
Philippe Campeau
00207402
PGAP3 (2x)_individual 1
PubMed: Yavarna et al., 2015
Paper presents a compilation of many genes. No detailed information on specific PGAP3 patients.
-
-
-
Middle Eastern
-
-
-
-
HPMRS4;GPIBD10
ID, global DD, epilepsy, dysmorphism, microcephaly and other structural brain anomalies, autism
1
1
Philippe Campeau
00207403
PGAP3 (2x)_individual 2
PubMed: Yavarna et al., 2015
Paper presents a compilation of many genes. No detailed information on patient.
-
-
-
Middle Eastern
-
-
-
-
HPMRS4;GPIBD10
ID, global DD, epilepsy, dysmorphism, microcephaly and other structural brain anomalies, autism
1
1
Philippe Campeau
00207405
II-1
PubMed: Sakaguchi et al., 2018
Novel homozygous PGAP3 mutation (c.314C>A, p.Pro105Gln) in a Croatian patient. Born to healthy and nonconsanguineous parents (from the same region) after an uneventful pregnancy.
M
no
Croatia (Hrvatska)
Croatian
>08y
-
-
Orthotics at 6 years with no improvements, intensive physical therapy for the marked generalized hypotonia. Phenobarbital and Valproate for seizures. 200 mg of pyridoxine daily for neuronal symptoms.
HPMRS4;GPIBD10
Multiple congenital anomalies (broad nasal bridge, tented upper lip vermilion, cleft palate, low set ears, micrognathia, retrognathia, brachytelephalangy, left sided cryptorchidism, wide feet, and broad toes). Progressive thoracic scoliosis. Hypotonia. Recurrent generalized seizures with dysrhythmic electroencephalographic paroxysmal changes. Thin corpus callosum. Severe psychomotor developmental delay, autistic behavior, and bruxism. Vision and hearing are normal, but cannot control egestion. Elevated ALP levels.
1
1
Philippe Campeau
00331543
17DG0809
PubMed: Maddirevula 2018
family
M
yes
-
Arab
-
-
-
-
skeletal dysplasia
Hypoglycemia, Feeding difficulties in infancy, Bifid uvula, Recurrent infections, Febrile seiz Yes
1
1
LOVD
00331544
14DG0578
PubMed: Maddirevula 2018
family
F
yes
-
Arab
-
-
-
-
skeletal dysplasia
Megalocornea, Global developmental delay, Buphthalmos, Overfolded helix, MicrognathiaYes
1
1
LOVD
00331545
12DG2300 , 12DG2301
PubMed: Maddirevula 2018
family, 2 affected (F, M)
F;M
yes
-
Arab
-
-
-
-
skeletal dysplasia
Diaphragmatic eventration, Global developmental delay, Microcephaly, Seizures, RecurrenNo
1
2
LOVD
00331546
14DG0816 , 16DG0111
PubMed: Maddirevula 2018
family, 2 affected (2F)
F
yes
-
Arab
-
-
-
-
skeletal dysplasia
Aplasia/Hypoplasia of the cerebellar vermis, Enlarged cisterna magna, Multicystic kidney No
1
2
LOVD
00331547
14DG2083 , 14DG2084, 14DG2085
PubMed: Maddirevula 2018
family, 3 affected (F, 2M)
F;M
yes
-
Arab
-
-
-
-
skeletal dysplasia
Nonprogressive encephalopathy, Global developmental delay, Bulbous nose, Epicanthus, No
1
3
LOVD
00387892
M9000136
PubMed: Hu 2019
family, 2 affected individuals
-
-
Iran
Persia
-
-
-
-
ID
syndromic intellectual disability, microcephaly, epilepsy
1
2
Johan den Dunnen
00426144
10MS6600
PubMed: Al-Kasbi 2022
patient, other affecteds in family
M
-
Oman
-
-
-
-
-
ID
-
1
1
Johan den Dunnen
00440457
PED3570.1
PubMed: Nambot 2018
-
-
-
France
-
-
-
-
-
?
-
2
1
Johan den Dunnen
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