The CACNA1F gene homepage

This database is one of the "Eye disease" gene variant databases.
General information
Gene symbol CACNA1F
Gene name calcium channel, voltage-dependent, L type, alpha 1F subunit
Chromosome X
Chromosomal band p11.23
Imprinted Unknown
Genomic reference NG_009095.2
Transcript reference NM_001256789.1, NM_005183.2
Exon/intron information NM_005183.2 exon/intron table
Associated with diseases AIED, CORDX3, CSNB2A
Citation reference(s) -
Refseq URL Genomic reference sequence
Curators (1) Global Variome, with Curator vacancy
Total number of public variants reported 815
Unique public DNA variants reported 473
Individuals with public variants 813
Hidden variants 20
Download all this gene's data Download all data
Notes This database is one of the "Eye disease" gene variant databases.
Establishment of this gene variant database (LSDB) was supported by the European Community's Seventh Framework Programme (FP7/2007-2013) under grant agreement No 200754 - the GEN2PHEN project.
Date created March 06, 2009
Date last updated January 23, 2023
Version CACNA1F:230123

Graphical displays and utilities
Graphs Graphs displaying summary information of all variants in the database »
Reading frame checker The Reading-frame checker generates a prediction of the effect of whole-exon changes. Active for: NM_005183.2.
UCSC Genome Browser Show variants in the UCSC Genome Browser (full view, compact view)
Ensembl Genome Browser Show variants in the Ensembl Genome Browser (full view, compact view)
NCBI Sequence Viewer Show distribution histogram of variants in the NCBI Sequence Viewer

Links to other resources
Homepage URL
HGNC 1393
Entrez Gene 778
PubMed articles CACNA1F
OMIM - Gene 300110
OMIM - Diseases AIED (Aland Island eye disease (AIED))
CORDX3 (dystrophy, cone-rod, X-linked, type 3 (CORDX-3))
CSNB2A (blindness, night, stationary, congenital, type 2A (CSNB-2A))
GeneCards CACNA1F
GeneTests CACNA1F
Orphanet CACNA1F

Active transcripts




NCBI ID     

NCBI Protein ID     

00000427 X calcium channel, voltage-dependent, L type, alpha 1F subunit NM_005183.2 NP_005174.2 815
00025624 X transcript variant 2 NM_001256789.1 NP_001243718.1 330

Copyright & disclaimer
The contents of this LOVD database are the intellectual property of the respective submitter(s) and curator(s) of the individual records. Individual data entries may indicate which data license applies to that specific record. When no license is listed, no permissions are granted. Any unauthorized use, copying, storage, or distribution of this material without written permission from the curator(s) will lead to copyright infringement with possible ensuing litigation. Copyright © 2009-2023. All Rights Reserved. For further details, refer to Directive 96/9/EC of the European Parliament and the Council of March 11 (1996) on the legal protection of databases.

We have used all reasonable efforts to ensure that the information displayed on these pages and contained in the databases is of high quality. We make no warranty, express or implied, as to its accuracy or that the information is fit for a particular purpose, and will not be held responsible for any consequences arising from any inaccuracies or omissions. Individuals, organizations, and companies that use this database do so on the understanding that no liability whatsoever, either direct or indirect, shall rest upon the data submitter(s), curator(s), or any of their employees or agents for the effects of any product, process, or method that may be produced or adopted by any part, notwithstanding that the formulation of such product, process or method may be based upon information here provided.