Global Variome shared LOVD
CRTAP (cartilage associated protein)
LOVD v.3.0 Build 29 [
Current LOVD status
]
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Curators:
Gerard Pals
,
Sonna Stolk
,
Raymond Dalgleish
, and
Dimitra Micha
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All individuals with variants in gene CRTAP
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
38 entries on 1 page. Showing entries 1 - 38.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00081014
-
PubMed: Trujillano 2017
unaffected parents
-
-
-
-
-
-
-
-
OI7
Osteogenesis imperfecta, type VII (OMIM:610682)
1
1
Daniel Trujillano
00154406
25604815-
PubMed: Balasubramanian 2015
2-generation family, 1 affected, unaffected heterozygous carrier parents (first cousin)
F
-
United Kingdom (Great Britain)
Pakistan
-
-
-
-
CLCRP
see paper; ...
1
1
Johan den Dunnen
00327454
B39
PubMed: Demir 2021
analysis 43 OI patients
F
-
Turkey
-
-
-
-
-
OI
-
1
1
Johan den Dunnen
00331387
11DG1959
PubMed: Maddirevula 2018
family
M
yes
-
Arab
-
-
-
-
skeletal dysplasia
Skeletal dysplasia, Wide anterior fontanel, Micrognathia, Hand polydactyly, Narrow chest,Yes
1
1
LOVD
00331388
11DG2122
PubMed: Maddirevula 2018
isolated case
F
yes
-
Arab
-
-
-
-
skeletal dysplasia
Osteopenia , Recurrent fractures
1
1
LOVD
00373295
Family 3
PubMed: Caparrós-Martin 2013
-
-
-
Egypt
-
-
-
-
-
OI
-
1
1
Victor L Ruiz-Perez
00373296
Infant 3
PubMed: Barnes 2006
This patient has been reported subsequently as Proband 1 by
PubMed: Chang et al., 2010
. However, the mutation descriptions in that publication do not conform to HGVS guidelines.
-
-
Germany
-
-
-
-
-
OI
-
2
1
Raymond Dalgleish
00373297
-
PubMed: van Dijk 2009
This patient belongs to family 1 and is VI:5 in the pedigree. The variant detected in this patient has been shown by {PMID25641760:Mathijssen et al., 2015} to be a common cause of OI types IIB and III in a genetically isolated Dutch community.
-
-
-
white
-
-
-
-
OI
-
1
1
Gerard Pals
00373298
-
-
-
-
-
Pakistan
-
-
-
-
-
OI
-
1
1
Giacomo Venturi, Massimiliano Corradi, Alberto Gandini
00373299
Proband 1
PubMed: Baldridge 2008
This patient is referred to as Family 43 in {PMID21239989:Pyott et al., 2011}.
-
-
Lebanon
-
-
-
-
-
OI
-
1
1
Peter Byers
00373300
-
PubMed: van Dijk 2009
-
-
-
-
white
-
-
-
-
OI
-
3
1
Gerard Pals
00373301
-
PubMed: Valli 2012
-
-
-
Egypt
-
-
-
-
-
OI
-
1
1
Raymond Dalgleish
00373302
Family 3
PubMed: Stephen 2015
The patient has an affected twin sister & elder sister and the parents are consanguineous and confirmed to be heterozygous for the variant.
-
-
India
-
-
-
-
-
OI
-
1
1
Raymond Dalgleish
00373303
-
PubMed: van Dijk 2009
The patient is individual II:1 in family 3.
-
-
-
white
-
-
-
-
OI
-
2
1
Gerard Pals
00373304
Proband 3
PubMed: Baldridge 2008
-
-
-
Iran
-
-
-
-
-
OI
-
1
1
Peter Byers
00373305
-
PubMed: Li 2019
,
Journal: Li 2019
-
-
-
China
-
-
-
-
-
OI
-
2
1
Xiuli Zhao
00373306
Proband 2
PubMed: Baldridge 2008
-
-
-
-
white
-
-
-
-
OI
-
2
1
Peter Byers
00373307
-
PubMed: van Dijk 2009
The patient is from family 2.
-
-
Morocco
-
-
-
-
-
OI
-
1
1
Gerard Pals
00373308
No. 89
PubMed: Caparros-Martin 2016
-
-
-
Egypt
-
-
-
-
-
OI
-
1
1
Raymond Dalgleish
00373309
Infant 1
PubMed: Barnes 2006
This patient has been reported subsequently as Proband 3 by
PubMed: Chang et al., 2010
.
-
-
Pakistan
-
-
-
-
-
OI
-
1
1
Raymond Dalgleish
00373310
C3
PubMed: Bodian 2009
This patient is referred to as Family 44 in {PMID21239989:Pyott et al., 2011}.
-
-
Iceland
-
-
-
-
-
OI
-
1
1
Peter Byers
00373311
-
PubMed: van Dijk 2009
The patient is from family 5.; The patient was subsequently presented in Figure 6B of {PMID22570641:van Dijk et al., 2011} and described as having OI type III.
-
-
-
white
-
-
-
-
OI
-
1
1
Gerard Pals
00373312
-
-
-
-
-
-
-
-
-
-
-
OI
-
1
1
Margherita Maioli
00373313
-
PubMed: Morello 2006
The family in which this mutation was detected has previously been described by
PubMed: Ward et al., 2002
. Further studies on the affected children are presented by
PubMed: Fratzl-Zelman et al., 2009
. This patient is described as Individual T1 by {PMID25086671:Rauch et al., 2014}.
-
-
Canada
First Nations Canadian
-
-
-
-
OI
-
1
1
Peter Roughley
00373314
P5
PubMed: Barbirato 2015
-
-
-
-
-
-
-
-
-
OI
-
3
1
Raymond Dalgleish
00373315
OI_F9
PubMed: Shaheen 2012
-
-
-
Saudi Arabia
-
-
-
-
-
OI
-
1
1
Raymond Dalgleish
00373316
Proband 4
PubMed: Chang 2010
-
-
-
United States
African-American
-
-
-
-
OI
-
2
1
Raymond Dalgleish
00373317
-
PubMed: Ben Amor 2011
-
-
-
Sudan
-
-
-
-
-
OI
-
1
1
Peter Roughley
00373318
Infant 2
PubMed: Barnes 2006
This patient has been reported subsequently as Proband 2 by
PubMed: Chang et al., 2010
.; This patients family has the ID OI_F8 and is of Saudi Arabian origin ({PMID23054245:Shaheen et al., 2012}). This appears to be at odds with the original description of the patient as black.
-
-
-
black
-
-
-
-
OI
-
1
1
Raymond Dalgleish
00373319
-
PubMed: Morello 2006
This patient is referred to as Family 45 in {PMID21239989:Pyott et al., 2011}.
-
-
India
-
-
-
-
-
OI
-
1
1
Peter Byers
00373320
AN_005817
PubMed: Essawi 2018
,
Journal: Essawi 2018
-
-
-
Palestine
-
-
-
-
-
OI
-
1
1
Sofie Symoens
00373321
AN_005818
PubMed: Essawi 2018
,
Journal: Essawi 2018
-
M
-
Palestine
-
-
-
-
-
OI
-
1
1
Sofie Symoens
00373322
-
-
-
-
-
-
-
-
-
-
-
?
-
1
1
Raymond Dalgleish
00373323
-
-
-
-
-
-
-
-
-
-
-
?
-
1
1
Raymond Dalgleish
00373324
No. 53
PubMed: Caparros-Martin 2016
-
-
-
Egypt
-
-
-
-
-
OI
-
1
1
Raymond Dalgleish
00373325
No. 1010
PubMed: Caparros-Martin 2016
Both parents are heterozygous for the c.1112dup variant but no DNA was available for testing from the proband.
-
-
Sudan
-
-
-
-
-
OI
-
1
1
Raymond Dalgleish
00410179
Pat2
PubMed: Kuptanon 2022
,
Journal: Kuptanon 2022
-
F
yes
Thailand
-
-
-
-
-
OI7
Dentinogenesis imperfecta (HP:0000703), Blue sclerae (HP:0000592), Brachycephaly (HP:0000248), Macrocephaly (HP:0000256)
2
1
Thanakorn Theerapanon
00435092
Pat1
PubMed: Udupa 2023
A 20-week-old male fetus showed bone developmental abnormalities. The fetus was medically aborted.
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yes
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00y00m
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OI7
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1
Kim Worring
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