Global Variome shared LOVD
DDB1 (damage-specific DNA binding protein 1, 127kDa)
LOVD v.3.0 Build 30b [
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View all diseases associated with gene DDB1
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All individuals with variants in gene DDB1
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
10 entries on 1 page. Showing entries 1 - 10.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00207965
-
-
-
-
-
Brazil
-
-
-
-
-
?
-
3
1
Thayne Kowalski
00359620
Pat1
PubMed: White 2021
2-generation family, 1 affected, unaffected heterozygous carrier parents
F
-
-
white, Europe-North
-
-
-
-
NDD
birth 38w, weight 2040g (<3rd centile, length 47cm (10 centile); neonatal jaundice, nasogastric tube feeding (1w); weight 80.3kg 16y9m (95th percentile), 88kg 18y2m (97th centile), length 150.4cm 18y2m (2nd percentile); anterior anus with rectovaginal fistula; moderate hypotonia; moderate intellectual disability; normal vision; normal hearing; no seizures; MRI-brain mild ventriculomegaly; thick, light blonde eyebrows; deep-set eyes, upslanting palpebral fissures, epicanthic folds; early childhood short nose; very round cheeks; thin upper vermilion border, wide mouth; large ears with large and long ear lobes; short neck with excess skin at base neck (posterior thickening); fair skin; joint laxity; very small hands and feet, fourth metacarpal shortening bilaterally, brachydactyly; ADHD and anxiety requiring medication, hypothyroidism, recurrent otitis media
1
1
Johan den Dunnen
00359621
Pat2
PubMed: White 2021
2-generation family, 1 affected, unaffected heterozygous carrier parents
F
-
-
Jewish-Ashkenazi
-
-
-
-
NDD
birth 40w, weight 2500g (3-10th centile), length 49cm (42nd centile); neonatal hypoglycemia, tachypnea (birth), admitted to NICU for 1m; weight 52.7kg 9y2m (>97th centile), length 137cm 9y2m (75th centile), OFC 51cm 9y 2m (50th centile); accessory band across left ventricle heart, horseshoe kidney, anterior ectopic anus; moderate hypotonia; moderate intellectual disability; normal vision; bilateral hearing loss, wears aids; no seizures; MRI-brain thinning posterior body corpus callosum, non-specific abnormal signal genu corpus callosum, ventriculomegaly; prominent, straight and dark eyebrows with synophrys; long palpebral fissures with lateral extension, epicanthus inversus, long dark eyelashes, striking blue irides; short nose with small nares, hypoplastic alae nasi, narrow base, high nasal bridge; mid-face hypoplasia; normal mouth; low-set large ears with long fleshy lobes; short neck; hirsutism on back, fibro-fatty deposition lateral dorsal aspect torso with thickened overlying skin ; significant cutaneous syndactyly of 2-3 toes, brachydactyly, tapering fingers; nasal voice with some articulation difficulties, marked truncal obesity
1
1
Johan den Dunnen
00359622
Pat3
PubMed: White 2021
2-generation family, 1 affected, unaffected heterozygous carrier parents
M
-
Turkey
-
-
-
-
-
NDD
birth 42w, weight 4040g (70th centile), length 54cm (60th centile), OFC 37cm (74th centile); weight 52.8kg 10y8m (>97th centile), length 138cm 10y8m (95th centile), OFC 53cm 10y 8m (79th centile); mild hypotonia; moderate developmental delay; normal vision; normal hearing; no seizures; synophrys; small eyes; normal nose; normal midface; normal mouth; large earlobes; normal neck; normal skin; short toes; frequent otitis media
1
1
Johan den Dunnen
00359623
Pat4
PubMed: White 2021
2-generation family, 1 affected, unaffected heterozygous carrier parents
F
-
Australia
white
-
-
-
-
NDD
birth 42w, weight 3480g (70th centile), length 52cm (93rd centile), OFC 34.5 (60th centile); weight 12.35kg 3y (4th centile), length 90cm 3y (14th centile), OFC 47cm 3y (5th centile); no hypotonia; mild intellectual disability (IQ69); hypermetropia, strabismus; conductive hearing loss requiring tympanostomy tubes; no seizures; MRI-brain mild delayed myelination; straight, dark, eyebrows with medial flare, lateral extension; lateral extension to palpebral fissures; short nose; midface hypoplasia; thin upper vermilion border; large ears with fleshy lobes; short neck; soft skin; short toes; 2y9m-obstructive sleep apnoea requiring adeno-tonsillectomy
1
1
Johan den Dunnen
00359624
Pat5
PubMed: White 2021
2-generation family, 1 affected, unaffected heterozygous carrier parents
F
-
Armenia
-
-
-
-
-
NDD
birth 36w, weight 2900g (25-50th centile), length 47cm (50th centile); neonatal feeding difficulties, jaundice; weight 45.5kg 13y9m (25-50th centile), BMI 23,55 (+1.85 SD), length 139cm 13y9m (<1st centile), OFC 52.4cm 13y9m (10-25th centile); horseshoe kidney with left vesico-ureteric reflux, pelvicalyceal dilatation kidney, megaureter; moderate hypotonia; mild-moderate intellectual disability; esotropia, hypermetropia, nystagmus; normal hearing; no seizures; dark, straight, heavy eyebrows; normal eyes; normal nose; round face,; mild midface hypoplasia, full cheeks; protruding upper lip, thin vermillion border, maxillary overbite, asymmetric occlusion of teeth; large fleshy ears and earlobes; short neck; hirsutism; short toes
1
1
Johan den Dunnen
00359625
Pat6
PubMed: White 2021
2-generation family, 1 affected, unaffected heterozygous carrier parents
M
-
-
white
-
-
-
-
NDD
birth 38w, weight 2960g (23rd centile); neonatal hypotonia, temperature instability, hypoglycemia, torticollis; weight 13.05kg 22m (82nd centile), length 87.6cm 18m (98th centile), OFC 48.2cm 18m (73rd centile); moderate hypotonia; mild intellectual disability; strabismus; normal hearing; episodes of eye rolling and head movement, no confirmed seizures; MRI-brain bilateral linear T2, flair hyperintensities central segmental tract pons; medial flare eyebrows; telecanthus, lateral extension to palpebral fissures, epicanthal folds with long eyelashes; small narrownose with narrow alae nasi; normal midface; ankyloglossia (underwent frenotomy), retrognathia, narrow tented lip; low set and fleshy ears; torticollis ; integumentary papules on chin
1
1
Johan den Dunnen
00359626
Pat7
PubMed: White 2021
2-generation family, 1 affected, unaffected heterozygous carrier parents
M
-
-
white, Slavic
-
-
-
-
NDD
birth 41w, weight 3180g (12th centile), length 51cm (72nd centile), OC 35cm (31st centile); ; weight 12.9kg 2y5m (36th centile), length 86.2cm 2y5m (11th centile), OFC 49.7cm 2y5m (25th centile); mild left hydronephrosis; moderate hypotonia; moderate developmental delay; convergent strabismus, nystagmus; normal hearing; no seizures; MRI-brain mild dilation lateral ventricles, thin corpus callosum; normal eyebrows; deeply set eyes, inner canthal folds, hypotelorism, convergent strabismus, nystagmus; small and upturned nose, hypoplastic alae nasi; full cheeks; normal mouth; large ears with simple morphology; normal neck; mild cutis laxa; 2-3 toe partial syndactyly; gastro-esophageal reflux
1
1
Johan den Dunnen
00359627
Pat8
PubMed: White 2021
2-generation family, 1 affected, unaffected heterozygous carrier parents
F
-
Mexico
-
-
-
-
-
NDD
neonatal hypotonia; metopic craniosynostosis; moderate hypotonia; moderate developmental delay; normal vision; normal hearing; no seizures; medial flare eyebrows; apparent telecanthus with proptosis, epicanthus inversus; depressed nasal bridge; mid-face hypoplasia; normal mouth; normal ears; normal neck; normal skin
1
1
Johan den Dunnen
00443865
-
-
-
F
yes
Turkey
-
-
-
-
-
DD
Spastic diplegia (HP:0001264) Bulbar signs (HP:0002483) Flexion contracture (HP:0001371)
1
1
Ece Sonmezler
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