Global Variome shared LOVD
FAM20A (family with sequence similarity 20, member A)
LOVD v.3.0 Build 30b [
Current LOVD status
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Global Variome, with Curator vacancy
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View all transcripts of gene FAM20A
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View all variants affecting transcripts
View unique variants in gene FAM20A
View all variants in gene FAM20A
Full data view for gene FAM20A
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View all individuals with variants in gene FAM20A
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View all diseases associated with gene FAM20A
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View available phenotype columns
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View all screenings for gene FAM20A
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All individuals with variants in gene FAM20A
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
30 entries on 1 page. Showing entries 1 - 30.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00107849
-
PubMed: Cho 2012
-
F
-
Korea
-
-
-
-
-
AI1G
Amelogenesis imperfecta; Autosomal recessive hypoplastic amelogenesis imperfecta; Gingival hyperplasia; Pulp stones; Prolonged retention of the deciduous teeth; Delayed or failed eruption of permanent teeth;
1
1
JUNG-WOOK KIM
00107850
-
PubMed: Cho 2012
-
F
-
Korea
-
-
-
-
-
AI1G
Amelogenesis imperfecta; Autosomal recessive hypoplastic amelogenesis imperfecta; Gingival hyperplasia; Pulp stones; Prolonged retention of the deciduous teeth; Delayed or failed eruption of permanent teeth;
2
1
JUNG-WOOK KIM
00107851
-
PubMed: Cho 2012
-
M
-
Korea
-
-
-
-
-
AI1G
Amelogenesis imperfecta; Autosomal recessive hypoplastic amelogenesis imperfecta; Gingival hyperplasia; Pulp stones; Prolonged retention of the deciduous teeth; Delayed or failed eruption of permanent teeth;
1
1
JUNG-WOOK KIM
00107852
-
PubMed: Cho 2012
-
M
-
Korea
-
-
-
-
-
AI1G
Amelogenesis imperfecta; Autosomal recessive hypoplastic amelogenesis imperfecta; Gingival hyperplasia; Pulp stones; Prolonged retention of the deciduous teeth; Delayed or failed eruption of permanent teeth;
1
1
JUNG-WOOK KIM
00264122
FamPatII1
PubMed: O'Sullivan 2011
3-generation family, 4 affected (3F, M), unaffected heterozygous carrier parents/relatives
F
yes
Brazil
-
-
-
-
-
AI
see paper; …, amelogenesis imperfecta, gingival fibromatosis
1
4
Johan den Dunnen
00264123
FamPatII2
PubMed: O'Sullivan 2011
-
F
yes
Brazil
-
-
-
-
-
AI
see paper; …, amelogenesis imperfecta, gingival fibromatosis
1
1
Johan den Dunnen
00264124
FamPatII3
PubMed: O'Sullivan 2011
-
M
yes
Brazil
-
-
-
-
-
AI
see paper; …, amelogenesis imperfecta, gingival fibromatosis
1
1
Johan den Dunnen
00264125
FamPatII7
PubMed: O'Sullivan 2011
-
F
yes
Brazil
-
-
-
-
-
AI
see paper; …, amelogenesis imperfecta, gingival fibromatosis, mental retardation
1
1
Johan den Dunnen
00264126
Fam1
PubMed: Wang 2013
4-generation family, 3 affected (2F, M), unaffected heterozygous carrier parents/relatives
F;M
-
-
Caribbean
-
-
-
-
AI
see paper; …, severe enamel hypoplasia, failed tooth eruption, intrapulpal calcifications, enlarged gingiva, nephrocalcinosis
1
3
Johan den Dunnen
00264127
Fam2
PubMed: Wang 2013
5-generation family, 1 affected, unaffected heterozygous carrier parents/relatives
M
yes
-
Jordan
-
-
-
-
AI
see paper; …, severe enamel hypoplasia, failed tooth eruption, intrapulpal calcifications, enlarged gingiva, nephrocalcinosis
2
1
Johan den Dunnen
00264128
Fam3
PubMed: Wang 2013
3-generation family, 2 affected cousins, unaffected heterozygous carrier parents/relatives
F;M
no
-
Iran
-
-
-
-
AI
see paper; …, severe enamel hypoplasia, failed tooth eruption, intrapulpal calcifications, enlarged gingiva, nephrocalcinosis
1
2
Johan den Dunnen
00264132
Fam1
PubMed: Jaureguiberry 2012
2-generation family, 1 affected, unaffected parents
M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
1
Johan den Dunnen
00264133
Fam2
PubMed: Jaureguiberry 2012
2-generation family, 2 affected (F, M), unaffected parents
F;M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
2
2
Johan den Dunnen
00264134
Fam3
PubMed: Jaureguiberry 2012
2-generation family, 2 affected (F, M), unaffected parents
F;M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
2
2
Johan den Dunnen
00264135
Fam4
PubMed: Jaureguiberry 2012
2-generation family, 2 affected (F, M), unaffected parents
F;M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
2
Johan den Dunnen
00264136
Fam5
PubMed: Jaureguiberry 2012
2-generation family, 1 affected, unaffected parents
F
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
1
Johan den Dunnen
00264137
Fam6
PubMed: Jaureguiberry 2012
2-generation family, 1 affected, unaffected parents
M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
1
Johan den Dunnen
00264138
Fam7
PubMed: Jaureguiberry 2012
2-generation family, 2 affected (F, M), unaffected parents
F;M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
2
Johan den Dunnen
00264139
Fam8
PubMed: Jaureguiberry 2012
2-generation family, 1 affected, unaffected parents
M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
1
Johan den Dunnen
00264140
Fam9
PubMed: Jaureguiberry 2012
2-generation family, 1 affected, unaffected parents
F
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
1
Johan den Dunnen
00264141
Fam10
PubMed: Jaureguiberry 2012
2-generation family, 1 affected, unaffected parents
F
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
2
1
Johan den Dunnen
00264142
Fam11
PubMed: Jaureguiberry 2012
2-generation family, 2 affected (F, M), unaffected parents
F;M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
2
2
Johan den Dunnen
00264143
Fam12
PubMed: Jaureguiberry 2012
2-generation family, 1 affected, unaffected parents
F
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
1
Johan den Dunnen
00264144
Fam13
PubMed: Jaureguiberry 2012
2-generation family, 2 affected (F, M), unaffected parents
F;M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
2
2
Johan den Dunnen
00264145
Fam14
PubMed: Jaureguiberry 2012
2-generation family, 1 affected, unaffected parents
F
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
1
Johan den Dunnen
00264146
Fam15
PubMed: Jaureguiberry 2012
2-generation family, 3 affected (F, 2M), unaffected parents
F;M
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
1
3
Johan den Dunnen
00264147
Fam16
PubMed: Jaureguiberry 2012
2-generation family, 2 affected (2F), unaffected parents
F
-
-
-
-
-
-
-
AI
nephrocalcinosis, characteristic dental defects (amelogenesis imperfecta, gingival hyperplasia, impaired tooth eruption)
2
2
Johan den Dunnen
00385895
V2.06
PubMed: Prasad 2016
-
F
-
-
-
-
-
-
-
AI
enamel renal syndrome, amelogenesis imperfecta
1
1
Johan den Dunnen
00385923
V2.32
PubMed: Prasad 2016
-
F
-
-
-
-
-
-
-
AI
amelogenesis imperfecta hypomineralised, hypoplastic
2
1
Johan den Dunnen
00435221
-
-
-
-
-
-
-
-
-
-
-
AI1G
Amelogenesis imperfecta, Delayed permanent dentition
1
1
Gemeinschaftspraxis für Humangenetik Dresden
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How to query
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