Global Variome shared LOVD
HSD17B10 (hydroxysteroid (17-beta) dehydrogenase 10)
LOVD v.3.0 Build 30b [
Current LOVD status
]
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Curators:
Stefanie Wieser
and
Martina Witsch-Baumgartner
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View all individuals with variants in gene HSD17B10
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View all diseases associated with gene HSD17B10
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All individuals with variants in gene HSD17B10
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
29 entries on 1 page. Showing entries 1 - 29.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00000166
-
PubMed: Tarpey 2009
208 families with X-linked mental retardation
M
-
-
-
-
-
for details contact Lucy Raymond (flr24 @ cam.ac.uk)
-
MRX;IDX
for details contact Lucy Raymond
1
208
Johan den Dunnen
00001683
-
PubMed: Ensenauer 2002
, Patient 2;
PubMed: Ofman 2003
, Patient 3
-
M
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation; developmental regression, dystonia, blindness, epilepsy
1
1
Division of Human Genetics, Innsbruck
00001684
-
PubMed: Ensenauer 2002
, Patient 1;
PubMed: Ofman 2003
, Patient 2
-
F
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation; psychomotor retardation
1
1
Division of Human Genetics, Innsbruck
00001685
-
PubMed: Rauschenberger 2010
, Case 2
-
M
?
-
-
-
-
-
-
HSD10MD
-
1
1
Division of Human Genetics, Innsbruck
00001686
-
PubMed: Rauschenberger 2010
, Case 1
-
M
?
Germany
-
00y06m
-
-
-
HSD10MD
ascertainment clinical presentation; severe hypotonia, no development, cardiomyopathy; phenotype onset neonatal; biochemical phenotype typical for disease
1
1
Division of Human Genetics, Innsbruck
00001687
-
PubMed: Poll-The 2004
-
M
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation; developemtnal delay, plagiocephaly, fontal bosssing, short nose, dysplastic ears. 5th finger and toe clinodactyly, moderate syndactyly of 2nd, 3rd 4th fingers
1
1
Division of Human Genetics, Innsbruck
00001688
-
Submitted by J. Zschocke
-
M
?
-
-
-
-
-
-
HSD10MD
-
1
1
Division of Human Genetics, Innsbruck
00001689
-
Submitted by J. Zschocke
-
M
?
-
-
-
-
-
-
HSD10MD
-
1
1
Division of Human Genetics, Innsbruck
00001690
-
PubMed: Olpin 2002
-
M
?
-
-
-
-
-
-
HSD10MD
-
1
1
Division of Human Genetics, Innsbruck
00001691
-
PubMed: García-Villoria 2009
, Patient 6
-
M
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation; developmental regression, ataxia, myoclonus, nystagmus, optic atrophy, retinopathy; biochemical phenotype typical for disease
1
1
Division of Human Genetics, Innsbruck
00001692
-
PubMed: Perez-Cerda 2005
, Patient 1
-
F
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation; psychomotor retardation, speech delay, hearing loss; phenotype onset first months of life; biochemical phenotype typical for disease
1
1
Division of Human Genetics, Innsbruck
00001693
-
PubMed: Perez-Cerda 2005
, Patient 2
-
M
?
-
-
00y02m
-
-
-
HSD10MD
ascertainment clinical presentation; neonatal presentation
1
1
Division of Human Genetics, Innsbruck
00001694
-
PubMed: Perez-Cerda 2005
, Patient 3
-
M
?
-
-
01y06m
-
-
-
HSD10MD
ascertainment clinical presentation; neonatal presentation
1
1
Division of Human Genetics, Innsbruck
00001695
-
PubMed: García-Villoria 2009
, Patient 5
-
M
?
-
-
00y07m
-
-
-
HSD10MD
ascertainment clinical presentation
1
1
Division of Human Genetics, Innsbruck
00001696
-
PubMed: García-Villoria 2009
, Patient 3
-
M
?
-
-
00y04m
-
-
-
HSD10MD
ascertainment clinical presentation
1
1
Division of Human Genetics, Innsbruck
00001697
-
PubMed: García-Villoria 2009
, Patient 4
-
M
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation; severe neurological impairment at 20 months
1
1
Division of Human Genetics, Innsbruck
00001698
-
PubMed: Reyniers 1999
,
PubMed: Lenski 2007
, Patient IV-1
-
M
?
Luxembourg
-
-
-
-
-
MRXS10
ascertainment clinical presentation; mild mental retardation, choreoathetosis, abnormal behavior
1
1
Division of Human Genetics, Innsbruck
00001699
-
PubMed: Tarpey 2009
-
?
?
-
-
-
-
-
-
MRXS10
ascertainment clinical presentation; mental retardation
1
1
Division of Human Genetics, Innsbruck
00001700
-
PubMed: Zschocke 2000
,
PubMed: Ofman 2003
, Patient 1
-
M
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation
1
1
Division of Human Genetics, Innsbruck
00001701
-
PubMed: Sass 2004
,
PubMed: Ofman 2003
, Patient 4
-
M
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation
1
1
Division of Human Genetics, Innsbruck
00001702
-
PubMed: Sutton 2003
-
M
?
-
-
-
-
-
-
HSD10MD
-
1
1
Division of Human Genetics, Innsbruck
00001703
-
PubMed: Cazorla 2007
-
M
?
-
-
-
-
-
-
HSD10MD
-
1
1
Division of Human Genetics, Innsbruck
00001704
-
PubMed: Seaver LH 2011
mixed ancestry (Portual, Hawaii, Japan, China)
M
?
-
-
-
-
-
-
HSD10MD
ascertainment clinical presentation; developmental regression, Hyperkinetic involuntary movement disorder, EEG showed diffuse background slowing and multifocal spike or polyspike activity
1
1
Division of Human Genetics, Innsbruck
00050664
-
PubMed: DDDS 2015
,
Journal: DDDS 2015
family, affected mother/child
M
-
United Kingdom (Great Britain)
-
-
-
Decipher
-
?
delayed speech and language development, abnormal facial shape, microcephaly, intrauterine growth retardation, global developmental delay, clinodactyly of the 5th finger, persistence of primary teeth, nasal speech, brachydactyly syndrome
1
2
Johan den Dunnen
00235339
Fam1PatII1
PubMed: Waters 2019
2-generation pedigree (1 affected male), unaffected heterozygous mother
M
-
Canada
French-Canadian
>11y
-
yes
-
HSD10MD, SPG4
elevation of 2-methyl-3-hydroxybutyrate (94; normal <18 mmol/mol creatinine) and tiglylglycine (74; normal <5 mmol/mol creatinine), progressive spastic quadriplegia (HP:0002478), motor delay (HP:0001270), dysarthria (HP:0001260)
1
1
Sebastien Levesque
00303087
Fam2Pat
PubMed: Waters 2019
3-generation family, 2 affected (2M), unaffected carrier mother/grandmother
M
-
Canada
-
-
-
-
-
HSD10MD
19m-transient episode of dystonia/ataxia, MRI brain normal, no cardiac abnormalities, no ophthalmological abnormalities; over time dystonic episodes gradually diminished in frequency and duration
1
2
Johan den Dunnen
00303088
Fam3
PubMed: Waters 2019
3-generation family, affected father/daugther
F
-
Canada
-
-
-
-
-
EA
8w-developmental delay, possible vision problems, signs of mild intellectual deficiency in both parents; 4m-developmental delay, mild axial hypotonia, suspected cortical blindness, no persistent vision problems; walk-15m, speechfew words; MRI brain 23m-normal
1
2
Johan den Dunnen
00303089
Fam4Pat
3-generation family, 1 affected males, heterozygous unaffected mother/grandmother
-
M
-
Canada
-
-
-
-
-
HSD10MD
suspected possible episodes of absence epilepsy, observed elevations liver transaminases, history of neonatal death sister and mother's new pregnancy; epilepsy not confirmed, cytomegalovirus infection explained transient hepatic abnormalities; 18m-asymptomatic, normal development
1
1
Johan den Dunnen
00391791
189P
-
-
F
no
Spain
-
-
-
-
-
HSD10MD, ID
-
1
1
Alejandro Brea-Fernández
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Legend
How to query
Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
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