Global Variome shared LOVD
KDM2B (lysine demethylase 2B)
LOVD v.3.0 Build 30b [
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All individuals with variants in gene KDM2B
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
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|
Text
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!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
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=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
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!=""
Text
!="p.0"
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combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
39 entries on 1 page. Showing entries 1 - 39.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00311920
-
PubMed: Faundes 2018
-
-
-
(United Kingdom (Great Britain))
-
-
-
-
-
?
-
1
1
Johan den Dunnen
00311921
-
PubMed: Faundes 2018
-
-
-
(United Kingdom (Great Britain))
-
-
-
-
-
?
-
1
1
Johan den Dunnen
00467800
Fam009PatBAB6693
PubMed: Charng 2016
2-generation family, affected brother/sister
F;M
yes
Saudi Arabia
-
-
-
-
-
NDD
developmental delay, microcephaly, hypotonia, infantile spasm
1
2
Johan den Dunnen
00471671
patient
PubMed: Dinckan 2018
2-generation family, 1 affected, unaffected heterozygous carrier parents
M
yes
Turkey
-
-
-
-
-
NDD
see paper; ..., absence lower anterior teeth; 2d-surgery anal atresia; 1y6m-surgery ankyloglossia; 7y-mild brachycephaly, low hanging columella, hypoplastic alae nasi, retrognathia; 7y-height 123 cm (50-75th), weight 22 kg (25-50th), OFC 52 cm (25th); 10y-oligodontia (absence lower incisors/canines/two upper premolars/all four lower premolars)
1
1
Johan den Dunnen
00471982
KDM2B_1
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., birth 40w; speech delay, no intellectual disability (SON-IQ86); autism; no hypotonia; no microcephaly; ventricular septal defect, atrial septal defect, fetal atrial flutter; normal kidneys
1
1
Johan den Dunnen
00471983
KDM2B_2
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 38w; normal development; 3y-no intellectual disability; no speech delay, comprehensibility suboptimal because of cleft and middle ear problems; no autism; no hypotonia; no seizures; hypertelorism, short palpebral fissures, short nose with broad nasal tip, surgical scars from correction cleft lip; hemangioma (labium and heel), hypopigmentation left thigh; no cardiac anomalies; cleft lip/palate, congenital contracture PIP 3rd and 4th digit of the left hand, pre-axial polydactyly of the right hand with hypoplastic thumb grade II-III
1
1
Johan den Dunnen
00471984
KDM2B_3.1
PubMed: Van Jaarsveld 2023
2-generation family, affected daugther/father
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 37w; delayed fine motor skills, delayed gross motor skills; severe intellectual disability; no speech; hyperactive behavior, hypersensitivive/sensory overload; hypotonia; no seizures; MRI/CT global atrophy, underdeveloped hippocampi, delayed myelination, cavum septum pellucidum et vergae, small plexus choroid cyst; stereotypic movements; high forehead, arched eyebrows, epicanthal folds, full upper eye lids and cheeks, heterochromia of the irides, anteverted nares, deep philtrum; bilateral hockey-stick creases palms; ventricular septal defect, DORV
1
1
Johan den Dunnen
00471985
KDM2B_3.2
PubMed: Van Jaarsveld 2023
father
M
-
-
-
-
-
-
-
NDD
see paper; ..., learning difficulties; speaks full sentences; ADD; no seizures; anteverted nares, deep philtrum, hypoplastic alae nasi, grooved ear lobes; ECG normal; COPD
1
1
Johan den Dunnen
00471986
KDM2B_4.1
PubMed: Van Jaarsveld 2023
2-generation family, affected son/sister/father
M
-
Netherlands
-
-
-
-
-
NDD
see paper; ..., brith 33+5 (twin pregnancy); delayed motor development, 18m-walk; mild intellectual disability; speech dealy, speaks full sentences (sometimes mumbling); autism (PDD-NOS); ADHD, behavorial difficulties, tantrums; 13y-focal seizures, 1y/1y6m-possible seizure; weak upper leg musculature (anamnestically); plagiocephaly, low hanging columella, thin lips, square chin
1
1
Johan den Dunnen
00471987
KDM2B_4.2
PubMed: Van Jaarsveld 2023
father
M
-
Netherlands
-
-
-
-
-
NDD
see paper; ..., mild intellectual disability, learning difficulties, special education; speaks full sentences; no seizures; low hanging columella, underdeveloped alae nasi, thin lips and prominent, square chin; ecreased renal function (adult); asthma/COPD; 37y-osteoporosis; stroke during episode of pneumonia/meningitis
1
1
Johan den Dunnen
00471988
KDM2B_4.3
PubMed: Van Jaarsveld 2023
sister
F
-
Netherlands
-
-
-
-
-
NDD
see paper; ..., brith premature, small for gestational age; mild motor delay; mild-moderate intellectual disability (14y-tIQ48); speaks full sentences (inarticulate); autism (PDD-NOS); behavorial difficulties, easily burst out in anger, anxious personality; no seizures; 5y-EEG normal; 5y-MRI normal; knock knees (anamnestically); high anterior hairline, deeply set eyes, horizontal eyebrows, bifid nasal tip, thin upper lip and broad chin with vertical dimple; mild constipation; urinary incontinence (at night)
1
1
Johan den Dunnen
00471989
KDM2B_5.1
PubMed: Van Jaarsveld 2023
2-generation family, affected son/mother
M
-
-
-
-
-
-
-
NDD
see paper; ..., brith 38+3; developmental delay, 3y-walk; mild-moderate intellectual disability; speech delay; autism; no seizures; upslanted palpebral fissures, short philtrum, wide mouth, full lips, wide spaced teeth; recurrent pneumothorax, recurrent otitis, scoliosis, unilateral hearing loss due to cholesteatoma.
2
1
Johan den Dunnen
00471990
KDM2B_5.2
PubMed: Van Jaarsveld 2023
mother
F
-
-
-
-
-
-
-
NDD
see paper; ..., no developmental delay; no intellectual disability; dyslexia; no autism; no hypotonia; no seizures; no cardiac anomalies; normal kidneys
2
1
Johan den Dunnen
00471991
KDM2B_6
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., brith 36w; no intellectual disability (non-verbal IQ97), follows normal education; speech delay; no autism; ADHD; no hypotonia; no seizures; MRI/CT normal; cogenital ptosis, deep set eyes, downslanted palpebral fissures,long face, flat face, thin upped and lower lip vermilion, deep philtrum, prominent chin, broad nasal bridge; skin hyperpigmentation neck/hands; no cardiac anomalies; normal kidneys; cryptorchidism; prolonged bleeding after adenotomy (no bleeding disorder identified)
1
1
Johan den Dunnen
00471992
KDM2B_7
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., brith 41+3; global developmental delay, 18m-walk; no intellectual disability (IQ83), learning difficulties; speech delay, understand more than speaks, 3y-some words, 7y-short sentences; autism (PDD-NOS); ADHD; no hypotonia; no seizures; EEG normal; MRI/CT normal; hypertonia from birth; progressive partly congenital contractures (no myotonia; no paresis); upslanted palpebral fissures, long face, upturned nasal alae, cuppid-bow lips,flat, broad nasal bridge, deep philtrum, thin upper lip vermilions, thin lower lip vermilion, overfolded helix; flat feet, exorotation of foot; mild pulmonary stenosis, atrial septal defect corrected with operation; normal kidneys; inguinal hernia;myopia behavioral problems (impulsive); normal hearing
1
1
Johan den Dunnen
00471993
KDM2B_8
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., no intellectual disability; mild language delay; no autism; no hypotonia; no seizures; mild miteral regurgitation, small patent ductus arteriosus, mild pulmonic stenosis, moderate atrial septal defect; single kidney with cortical cysts/calcifications, 6y6m-normal kidney function
1
1
Johan den Dunnen
00471994
KDM2B_10
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., brith 37w; no developmental delay; mild intellectual disability (8y-IQ66); normal speech; no autism; no seizures; MRI/CT prenatally posterior fossa cyst, fetal macrosomia, 7y-MRI normal ; brachycephaly, ocular proptosis, hypertelorism, exophtalmia, sparse hair; pectus excavatum, skin hyperpigmentation, wide intermamillary distance; atrial septal aneurysm, moderate mitral regurgitation; normal kidneys; distal hyperlaxity
1
1
Johan den Dunnen
00471995
KDM2B_11
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 40+1; global developmental dela; intellectual disability; speech delay, 5y-short sentences; autism spectrum disorder; hyperactive; hypotonia; refractory infantile spasms, tonic drop seizures; EEG initially modified hypsarrhythmia with electroclinical spasms, evolved into generalized and multifocal spikes in sleep and awake; MRI/CT brain malformations, multifocal areas bilateral periatrial gray matter heterotopia, 2 foci of right frontal subcortical gray matter heterotopia, signal abnormality within adjacent parietal white matter, extending to overlying cortex (suspicious for multiple focal cortical dysplasias), asymmetric gyral folding right inferior frontal lobe/left mesial frontal lobe, hypoplasia anterior commissure; walking without difficulty; no facial dysmorphism; normal EKG; skin two hypopigmented macules (right lower back, gluteal cleft); subtle variability iskin color on torso possibly representing confetti skin changes under woods lamp only; few small, hypopigmented patches in mid-periphery left retina
1
1
Johan den Dunnen
00471996
KDM2B_12
PubMed: Monies 2017
,
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., hypotonia; polyhydramnios, club foot, contractures, multiple arthrogryposis, undescended testis
1
1
Johan den Dunnen
00471997
KDM2B_13
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 40w; moderate developmental delay; mild intellectual disability; moderate speech delay; no autism; hypotonia; no seizures; MRI normal; synophrys, arched eyebrows, narrow bifrontal diameter, small oral opening; pectus excavatum, contracture left 5th finger; pulmonic stenosis, atrioseptal defects (x2), birth patent ductus arteriosus/patent foramen ovale; normal kidneys; anteriorly placed anus; 3 hemangiomas, precocious puberty; birth poor suck; feeding difficulties (G-tube fed); overgrowth
1
1
Johan den Dunnen
00471998
KDM2B_14
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., brith 42w; moderate global developmental delay; intellectual disability (Griffiths 4y-IQ64); speech delay, only few words; no autism; 2y-hetero-aggressive behavior, hyperactivity; hypotonia; seizures; 2y6m/12y-EEG generalized paroxysisms, epileptiform abnormalities; MRI/CT reduced brain volume, ex-vacuo dilatation lateral asymmetric venticles (left>right), reduced white matter involving corpus callosum, cerebellar hypoplasia involving mainly inferior vermis, large cisterna magna, thin quadrigeminal lamina, occipital plagiocephaly; motor delay; postnatal macrocephaly, frontal bossing, right preauricular sinus, mild bleharophimosis, palpebral fissures; plagiocephaly, cubitus valgus, hypoplastic thenar and hypotenar eminences, hypoplasia of palmar creases, short 3rd fingers (3rd centile, with normal palm lenght); 2y5m-normal echoscan, 6y-8y-QT interval at superior limits, -9yQT interval normal; recurrent cystitis, 12y-normal abdominal echoscan; 2y6m/12y2m-normal eye fundus; growth failure, BMI 14.47 (<3th centile)
1
1
Johan den Dunnen
00471999
KDM2B_17
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 39w+1; moderate developmental delay; presumed intellectual disability; speech delay, primarily nonverbal; autism; acts out; hypotonia; seizures; EEG slow wave pattern; MRI/CT small subarachnoid hemorrhage (infancy), three, tiny foci of T2/flair hyperintense signal within left posterior centrum semiovale/periatrial white matter, 4y-polymicrogyria; Motor delay, toe walking; narrow palpebral fissures, upturned nasal tip, anteverted nares, downturned corners of the mouth; birth patent foramen ovale; normal kidneys; failure to thrive, <2y-feeding difficulties; overweight; frequent ear infections; difficulty getting to sleep
1
1
Johan den Dunnen
00472000
KDM2B_18
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., brith 34w; moderate global developmental delay; speech delay; MRI normal; global developmental delay; facial asymmetry, epicanthal folds, retrognathia; plagiocephaly, clinodactyly; unilateral kidney agenesis; coloboma; failure to thrive; hypertrichosis
1
1
Johan den Dunnen
00472001
KDM2B_19
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 36w; severe developmental delay; intellectual disability; no speech; hypotonia; occasional clonic seizures; EEG abnormal right centro-temporal spikes; MRI/CT periventricular white matter gliosis, thin corpus callosum; epicanthus, low-set ears, thin eyebrows, mild micrognathia; atrial septal defect; bilateral thrombotic microangiopathy; severe neurosensorial hypoacusis; thrombocytopenia; atypical hemolytic uremic syndrome
1
1
Johan den Dunnen
00472002
KDM2B_20
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 39w; speech delay, sentences; mild autistic features;; no seizures; oculomotor defect (right lateral muscle); high forehead, pseudo-synophrys, enophtalmy, bitemporal narrowing, thick lips, open mouth; fine skin; flat feet; ultrasound ow grade mitral insuffciency; ECG normal; normal ultrasound; scoliosis
1
1
Johan den Dunnen
00472003
KDM2B_22
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., brith 41w; no developmental delay; no intellectual disability; speech delay; no autism; hypotonia; no seizures; EEG normal; MRI/CT left small rudimental eye with unrecognizable optic nerve, left lateral ventricular dilatation; neonatal period hypotonia of upper limbs, hypertonia lower limbs; unilateral anophthalmia (left), hypoplasic eyebrow (left), facial asymetry, retrognathia, eversion of lower lip, posterior plagiocephaly (left), broad forehead, bulging forehead; plagiocephaly (suspected); no cardiac anomalies; unilateral kidney agenesis (left); sensorineural hearing loss; unilateral anophthalmia (left)
1
1
Johan den Dunnen
00472004
KDM2B_23
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 38w; delayed development, delayed motor development; 3y5m-no stand; severe intellectual disability; no speech; no autism; hypotonia; no seizures; motor delay, lower limb muscle weakness, decreased muscle mass bilateral lower limb; mild hypertelorism; atrial septal defect (after receiving operation); left kidney defect, genesis, right vesicoureteral reflux; squint, congenital obstructio ductus nasolacrimalis
1
1
Johan den Dunnen
00472005
FamPatIV9;KDM2B_24.1
PubMed: Yokotsuka-Ishida 2021
,
PubMed: Van Jaarsveld 2023
4-generation family, 3 affected sibs/mother
F
-
Japan
-
-
-
-
-
NDD
see paper; ..., poor grades in elementary/middle school; intellectual disability (31y-IQ39); epicanthus, retrognathia; schizophrenia
1
1
Johan den Dunnen
00472006
FamPatIII4;KDM2B_24.2
PubMed: Yokotsuka-Ishida 2021
,
PubMed: Van Jaarsveld 2023
mother
F
-
Japan
-
-
-
-
-
NDD
see paper; ..., worked as dressmaker, graduated elementary school; schizophrenia
1
1
Johan den Dunnen
00472007
FamPatIV5;KDM2B_24.3
PubMed: Yokotsuka-Ishida 2021
,
PubMed: Van Jaarsveld 2023
older sister
F
-
Japan
-
-
-
-
-
NDD
see paper; ..., intellectual disability, resource room class in middle school, worked in spinning factory; schizophrenia
1
1
Johan den Dunnen
00472008
FamPatIV8;KDM2B_24.4
PubMed: Yokotsuka-Ishida 2021
,
PubMed: Van Jaarsveld 2023
older brother
M
-
Japan
-
-
-
-
-
NDD
see paper; ..., moderate-severe intellectual disability(20y-IQ35); speech delay, simple words; schizophrenia
1
1
Johan den Dunnen
00472009
patient;Pat8;KDM2B_25.1
PubMed: Chouery 2013
,
PubMed: Krzyzewska 2019
,
PubMed: Van Jaarsveld 2023
2-generation family, affected daugther/father
F
-
Lebanon
-
-
-
-
-
NDD
see paper; ..., brith at term; moderate-severe developmental delay; severe intellectual disability; no speech; hypotonia; refractory infantile spasms (now controlled); EEG hypsarrhythmia; MRI/CT mild diffuse atrophy; never walked; flat face, full cheeks, bulbous nasal tip, thin lower lip, highly arched palate, retrognathia, narrow ear orifices, 4 café-au-lait spots (back, thigh, 2 buttocks); no cardiac anomalies; normal renal function; normal hearing; normal vision; younger age constipation; bilateral hip luxation; no menarche yet; very small breasts (p1 stage)
1
1
Johan den Dunnen
00472010
father;KDM2B_25.2
PubMed: Chouery 2013
,
PubMed: Krzyzewska 2019
,
PubMed: Van Jaarsveld 2023
father
M
-
Lebanon
-
-
-
-
-
NDD
see paper; ..., no developmental delay; no intellectual disability; no speech delay; no autism; no hypotonia; no seizures; 14y-insulin dependent diabetes
1
1
Johan den Dunnen
00472011
Pat9;KDM2B_29
PubMed: Krzyzewska 2019
,
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., developmental delay; intellectual disability; delayed speech; autism; ADHD; prominent forehead, telecanthus, epicanthus, short upturned nose, large nose bridge, full cheeks, full lower lip, short philtrum, macroglossia, prognathism; clinodactyly; preauricular tags, irregular teeth, oligodontia
1
1
Johan den Dunnen
00472012
DGDP343;Pat10;KDM2B_30
PubMed: Labonne 2016
,
PubMed: Krzyzewska 2019
,
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
Korea
-
-
-
-
-
NDD
see paper; ..., brith 41+5; 6m-torticollis, developmental delay, now severe development delay; not walking, lost crawl; no speech; intellectual disability; social engagement very limited, autism spectrum diagnosis; mild-moderate hypotonia; seizures, changed from myoclonic to tonic/tonic clonic; EEG generalized epileptiform activity; MRI normal; displayed some unusual finger movements, repetitive scratching one arm, high pain tolerance; narrow face, prominent forehead, hypertelorism; mild tapering fingers, mild plagiocephaly; no cardiac anomalies; normal kidneys; poor head righting bilaterally, mild-moderate head lag, significant tightness in motion; 19m-eizures; MRI brain normal; wheelchair bound; G-tube fed; incontinence
1
1
Johan den Dunnen
00472013
KDM2B_31
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
-
-
-
-
NDD
see paper; ..., brith 40+6; mild developmental delay, 15m-walk, oral disorders; mild-moderate ID; delayed speech, few words; no hypotonia; no seizures; MRI/CT thin callosum corpus,delayed frontal myelination, posterior fossa cyst; stereotypic movements; thin long face, helix crus absent, large lobe, square chin, enophtalmia, hypotelorism, upslanted palpebral fissures; hyperpigmentation shoulder; atrial septal defect with right ventricular dilatation; normal kidneys ultrasound; bilateral talus pes, unilateral cryptorchidism, kyphosis,; congenital obstruction ductus nasolacrimalis
1
1
Johan den Dunnen
00472014
09-99A;Pat11;KDM2B_33
PubMed: Qiao 2013
,
PubMed: Krzyzewska 2019
,
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
-
-
-
-
-
NDD
see paper; ..., brith 40+3; global developmental delay; moderate ID; speech delay, very limited speech; autism, confirmed psychometrically, moderate-severe intellectual disability; deterioration of verbal expression progressing to selective mutism in adolescence, anxiety disorder, poor visual attention, poor social reciprocity, very socially withdrawn, preference for routine/ritualized behaviours, shows repetitive mannerisms including twirling hair/picking/scratching various parts ear/face; hypotonia; seizures, occassional staring spells, usually responsive to name and showing normal EEG; EEG normal; MRI/CT normal; complex language disorder, mixed learning disorder, anxiety disorder; moderate intellectual disability; strabismus; coarsened, mildly dysmorphic facial features with up-slanting palpebral fissures, synophrys, small, low-set and posteriorly rotated ears, high nasal root with thick alae nasi and a square tip, prominent front incisors, narrow palate; very tapered fingers, prominent fingertip pads, bilateral hypoplastic nails both halluces; symmetric tall stature; X-ray chest thoracic vescera heart size upper limit of normal; normal kidneys; Bilateral bronchial thickening and lower airway inflammation identified. Prior episode of right middle and lower lobe air space opacity, consitent with pneumonia; patchy red raised skin, thick ichthyotic skin, diagnosed with a T-cell skin lymphoma (mutliple hyper-pigmented patches involving trunk/limbs) consistent with mycosis fungoides (intermittent radiation treatment); normal ophthalmology; normal audiology assessments
1
1
Johan den Dunnen
00472015
SCZ1001;KDM2B_34
PubMed: Girard 2011
,
PubMed: Van Jaarsveld 2023
2-generation family, 1 affected, unaffected non-carrier parents
-
-
Canada
-
-
-
-
-
NDD
-
1
1
Johan den Dunnen
00472016
patient
PubMed: Yokotsuka-Ishida 2021
patient
-
-
Japan
-
-
-
-
-
NDD
-
1
1
Johan den Dunnen
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