Global Variome shared LOVD
MAPKAPK5 (mitogen-activated protein kinase-activate...)
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All individuals with variants in gene MAPKAPK5
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
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Operator
Column type
Example
Matches
Text
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space
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^
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^p.(Arg
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$
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=""
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!=""
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!=""
Text
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combination
Text
*|Ter !fs
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Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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7 entries on 1 page. Showing entries 1 - 7.
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How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00414273
Pat1
PubMed: Maroofian 2023
4-generation family, 1 affected, unaffected heterozygous parents/relatives
F
yes
Pakistan
-
-
-
-
-
NDD
decreased foetal movements, PIH in mother; birth at term; height 91cm (-2.3 SD); weight 8kg (-4.8 SD); OFC 43cm (-4.3 SD); hypotonia in infancy; failure-to-thrive; developmental delay, 18m-unsupported sitting, 30m-supported walking, speech delay (can say 2-3 words); no nonverbal communication, understands simple commands like give me; profound developmental dealy/ intellectual disability (8m at 4y); not able to perform basic activities of daily living, GMFCS level IV; speech regression; no progressive course; Aloof behaviour, abnormal hand movements and teeth grinding; no seizures; EEG normal; weakness, hypotonia, diminished reflexes, 18m-ataxia, broad based gait, dyskinetic movements; brachycephaly; sparse scalp hair, bitemporal narrowing, straight eyebrows, deep-set eyes, bilateral ptosis (right>left), epicanthic folds, triangular nose with full tip, hypoplastic nares, low-set columella, prominent medial maxillary incisors, long philtrum, full and tented upper lip, maxillary overbite, microretrognathia; hirsutism, sparse scalp hair; short index finger with absent nail and nail bed, sandal gap; bilateral hyperopia, +2.50, ptosis; mild hearing loss (below 30dB), post-ligual, bilateral sensorineural hearing loss; superior cerebellar vermian and pontine atrophy, along with cerebellar vermian hypoplasia and generalised cerebellar dysfoliation. The frontal lobe was underdeveloped with anterior callosal hypoplasia; no congenital heart defects; no renal problems; no GIT; no respiratory problems; feeding difficulties, can take semi-solids only
1
1
Stephanie Efthymiou
00414274
Pat3
PubMed: Maroofian 2023
5-generation family, 1 affected, unaffected heterozygous parents/relatives
M
yes
Egypt
-
-
-
-
-
NDD
oligohydraminos, incucbated for 7 days for tachypnea; 39w-brith, weight (2800gm), length (49cm), OFC (34.7cm); height 83cm (-1 SD); weight 10kg (-2SD); OFC 45.5cm (-2.3SD); hypotonia in infancy; mild failure-to-thrive; mild developmental delay, 9m-head support, 14m-sit, 1y9m-walk for 4-10 meters; no nonverbal communication (able to pronounce few words); moderate developmental dealy/ intellectual disability; not yet able to perform basic activities of daily living; no regression; no progressive course; excessive clapping hands, smiling; no seizures; EEG normal; hypotonia, reflexes present; plagiocephaly, brachycephaly, bifrontal prominent; cranio-facial asymmetry, depression over glabella, sparse eyebrows, bilateral ptosis, shorter left palpebral fissure, hypertelorism, infraorbital creases, full nasal tip, short columella, low-set ears, absent superior crus of antihelix, uplifted ear lobes, small mouth, full tented upper lip, thin lower lip vermilion, maxillary overbite, retrognathia; sparse sclap/eye brows hair, mild hypoplasitc nails; bilateral incomplete transverse palmar crease, normal fingers and nails, mild proximal syndactyly of right second and third fingers, broad big toes, short 2-5th toes, prominent sandal gap with deep groove over medial aspect second toe; mild inconsistent stramismus; no hearing loss; Immaturity of myelination (delayed- or hypo- myelination pattern) along with cerebellar vermian hypoplasia and reduced parenchymal volume in the frontal lobes; no congenital heart defects; abdominal pelvic ultra-sound showed left testis, left inguinal canal, mild left tunical hydrocele; 1d-genital anomalies, anchored phallus, shawl scrotum, absent left tesits; mild feeding difficulties
1
1
Stephanie Efthymiou
00414278
Pat2
PubMed: Maroofian 2023
4-generation family, 1 affected, unaffected heterozygous parents/relatives
F
yes
Palestine
Arab
-
-
-
-
NDD
normal prenatal history; born hypotonic, pale, with no respiratory effort, needed intubation; 37w-birth, weight (1825 g), OFC (28.5 cm); height 120cm (18th); weight 27.9kg (72th); OFC 50.2cm (14th); hypotonia in infancy; no failure-to-thrive; developmental delay, 30m-walk, speech delay (can say sentences yet gibberish); severe developmental dealy/ intellectual disability; not able to perform basic activities of daily living; no regression; no progressive course; no behavioural/psychiatric symptoms; no seizures; no hypotonia; brachycephaly; highly arched eyebrows with medial flaring, narrow palpebral fissures, low-set ears, low columella, small chin; hirsutism; short fingers; bilateral optic disc colobomas; astigmatism; suspected hearing loss; cerebellar vermian hypoplasia and frontal lobar underdevelopment along with hypoplasia of the anterior aspect of corpus callosum. Unspecific foci of white matter hyperintensities were also shown in the frontal lobes; 1d-normal echocardiography; no renal problems; no GIT; no respiratory problems; no feeding difficulties
1
1
Stephanie Efthymiou
00435412
Fam2Pat1
PubMed: Horn 2021
2-generation family, 1 affected, unaffected heterozygous parents
M
yes
Turkey
-
-
-
-
-
NDD
38w-birth, weight 2,600g (-1.6 SD), length 53cm (+0.8 SD), OFC 32.5cm (-1.7 SD); height 82.5cm (-0.4 SD); weight 10.8 kg (-0.6 SD); microcephaly OFC 43.5cm (-4.3 SD); no failure-to-thrive; severe developmental delay, 19m-no sitting/no speech; no seizures; EEG signs of increased seizure susceptibility in the left temporo-occipital region; 10m-profound muscular hypotonia; narrow palpebral fissures, thin lips, high arched palate, retrognathia, uplifted ear lobes, short neck, Pierre-Robin sequence (retrognathia, glossoptosis, high arched palate without cleft), short, narrow, and upslanted palpebral fissures, a small mouth with thin lips, uplifted ear lobes, a short neck, nystagmus; sparse hair; synpolydactyly with additional hypoplastic ray between fourth and fifth digit right foot; cataracts, sclerocornea, nystagmus; bilateral sensorineural hearing loss; thin corpus callosum; complex congenital heart defect including double inlet left ventricle and malposition of great arteries; hypospadias
1
1
Johan den Dunnen
00435413
Fam1Pat1
PubMed: Horn 2021
2-generation family, 2 affected sisters, unaffected heterozygous parents
F
no
Egypt
-
-
-
-
-
NDD
intrauterine growth retardation, tetralogy of Fallot; 40w-birth, weight 2,200g (-2.71 SD), length 48 cm (-0.65 SD), OFC 32 cm (−1.9 SD); postnatal short stature, height 112.5cm (-3.49 SD); failure to thrive, weight 16kg (-7.03 SD); OFC 51 cm (-0.68 SD); failure-to-thrive; severe developmental delay, 9y-no walking, 9y-speech one word; no seizures; EEG abnormal findings consistent with generalized epileptogenic discharge of left side origin; bitemporal narrowing, prominent forehead; sparse hair, narrow palpebral fissures, prominent overhanging nasal tip, thin lips, retromicrognathia; synpolydactyly with additional hypoplastic ray between fourth and fifth digits, all extremities are affected, X-ray showed duplication middle and terminal phalanges right fifth finger and duplication terminal phalanx left fifth finger and extra hypoplastic metatarsal and extra phalanx between fourth and fifth toes; Pallor optic disc, postvisual pathway dysfunction; moderate loss of hearing in high frequency range; cerebellar vermian hypoplasia, Frontal underdevelopment; Tetralogy of Fallot; no renal problems; no GIT; no respiratory problems
1
2
Johan den Dunnen
00435414
Fam1Pat2
PubMed: Horn 2021
sister
F
yes
Egypt
-
-
-
-
-
NDD
36w-birth, weight 2,200g; postnatal short stature, height 76 cm (-3.85 SD); failure to thrive, weight 10kg (-2.41 SD); microcephaly OFC 44cm (-2.71 SD); failure-to-thrive; severe developmental delay, 2y7m-no head control/no speech; no seizures; EEG generalized abnormality; bitemporal narrowing, prominent forehead; sparse hair, narrow palpebral fissures, prominent overhanging nasal tip, thin lips, retromicrognathia, low-set simple ears; hypoplastic nails; overlapping fingers, hypoplastic nails; nystagmus; cavum septum pellucidum, thin corpus callosum, cerebellar vermian hypoplasia; congenital heart defects, patent ductus arteriosu, atrial septal defect; hydroureteronephrosis, vesicoureteral reflux
1
1
Johan den Dunnen
00435415
patient
PubMed: Vecchio 2022
2-generation family, 1 affected, unaffected heterozygous parents/relatives
M
no
Italy
-
-
-
-
-
NDD
20w- fetal scan showed prefrontal edema, nasal bone hypoplasia, increased nuchal translucency, suspicious of aortic coarctation and ambiguous genitalia, premature rupture of membranes; 34.6w-birth, weight 1980g (−1.12 SD), length 42cm (−1.75 SD), OFC 30.5cm (0.1 SD); height 80 cm (−1.03 SD); Failure to thrive, weight 8,33 (−2.47 SD); microcephaly OFC 46.5cm (−1.76 SD); no failure-to-thrive; severe developmental delay, no walking, no speech, only sitting position acquired; severe developmental dealy/ intellectual disability; no seizures; EEG slow posterior activity and poor representation of the NREM sleep graph-elements; brachyturricephaly; narrow, and slightly downslanted, narrow palpebral fissures, hypoplastic nasal root, bulbous prominent overhanging nasal tip, small mouth with thin lips, arched palate, glossoptosis, retrognathia in Pierre-Robin sequence; sparse hair/eyebrows, toenail hypoplasia/dysplasia; short fingers, broad big toes, marked toenail hypoplasia/dysplasia; mild strabismus; no hearing loss; thin corpus callosum, mild vermian and ventral pons hypoplasia, olfactory bulbs absent.; congenital heart defects, intercoronary partially fused - bicuspid aortic valve, slight ascending aorta's dilation, hypertrabecular left ventricle and a dysmorphic aortic arch with mild acceleration flow; left kidney hypoplasia, right cryptorchidism with ipsilateral hemiscrotum's hypoplasia, penoscrotal transposition, coronal hypospadias; feeding difficulties
1
1
Johan den Dunnen
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