Global Variome shared LOVD
MVK (mevalonate kinase)
LOVD v.3.0 Build 30b [
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Curator:
Isabelle Touitou
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All individuals with variants in gene MVK
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
18 entries on 1 page. Showing entries 1 - 18.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00000067
-
PubMed: Bell 2011
-
-
-
-
-
-
-
-
-
-
-
1
1
Global Variome, with Curator vacancy
00233234
-
PubMed: Koyanagi 2019
,
Journal: Koyanagi 2019
analysis 1204 retinitis pigmentosa cases
-
-
Japan
-
-
-
-
-
retinal disease
-
1
1
Yoshito Koyanagi
00233235
-
PubMed: Koyanagi 2019
,
Journal: Koyanagi 2019
analysis 1204 retinitis pigmentosa cases
-
-
Japan
-
-
-
-
-
retinal disease
-
1
1
Yoshito Koyanagi
00233236
-
PubMed: Koyanagi 2019
,
Journal: Koyanagi 2019
analysis 1202 retinitis pigmentosa cases
-
-
Japan
-
-
-
-
-
retinal disease
-
1
343
Yoshito Koyanagi
00233237
-
PubMed: Koyanagi 2019
,
Journal: Koyanagi 2019
analysis 1204 retinitis pigmentosa cases
-
-
Japan
-
-
-
-
-
retinal disease
-
1
1
Yoshito Koyanagi
00233774
-
PubMed: Koyanagi 2019
,
Journal: Koyanagi 2019
analysis 1202 retinitis pigmentosa cases
-
-
Japan
-
-
-
-
-
retinal disease
-
1
33
Yoshito Koyanagi
00290591
-
PubMed: Narang 2020
,
Journal: Narang 2020
analysis 2794 individuals (India)
-
-
India
-
-
-
-
-
?
-
1
1
Mohammed Faruq
00290592
-
PubMed: Narang 2020
,
Journal: Narang 2020
analysis 2794 individuals (India)
-
-
India
-
-
-
-
-
?
-
1
1
Mohammed Faruq
00328506
14008687
PubMed: Taylor 2017
no family history retinal disease
M
-
United Kingdom (Great Britain)
-
-
-
-
-
retinal disease
retinal dystrophy (HP:0000556), failure to thrive (HP:0001508), neurodevelopmental abnormality (HP:0012759)
1
1
LOVD
00385163
56
PubMed: Jiman 2020
-
M
-
(United Kingdom (Great Britain))
-
-
-
-
-
retinal disease
HP:0001263 Global developmental delay; HP:0000365 Hearing impairment/loss; HP:0000821 Hypothyroidism; HP:0001508 Failure to thrive; HP:0001410 Decreased liver function; HP:0000548 Cone/cone-rod dystrophy
1
1
LOVD
00385166
59
PubMed: Jiman 2020
-
F
-
(United Kingdom (Great Britain))
-
-
-
-
-
retinal disease
HP:0010978 Abnormality of immune system physiology; HP:0000510 Rod-cone dystrophy;
2
1
LOVD
00386224
RPN-402
PubMed: Rodriguez-Munoz 2020
family fRPN-183, proband
F
-
Spain
-
-
-
-
-
retinal disease
-
1
1
LOVD
00386871
099-076
PubMed: Zampaglione 2020
-
?
-
-
-
-
-
-
-
retinal disease
-
1
1
LOVD
00409859
?
PubMed: Balgobind 2005
-
-
-
-
-
-
-
-
-
retinal disease
episodes of fever from the age of 9 months, recurring every 2 -4 weeks, usually, with no infection; during typical fever episodes: profound apathy, painful cervical lymphadenopathy and a macular rash over the extremities; CRP was strongly elevated (148 mg/L) with thrombocytosis but normal white cell counts; investigations into infectious and autoimmune causes: negative; urinary excretion of mevalonic acid: strongly elevated (5.46 mmol/mmol creatinine); mevalonate kinase deficiency confirmed by enzyme activity assay (<1% of mean activity of healthy controls); 3y6m: night blindness; fundoscopy: attenuated arterioles and pigment epithelial atrophy in the mid-periphery; full-field electroretinograms: no responses of rods and cones
2
1
LOVD
00409861
A-II:1
PubMed: Siemiatkowska 2013
family A, proband's older brother
M
-
Netherlands
white
-
-
-
-
retinal disease
best corrected visual acuity right, left eye: 20/16, 20/20; refraction right eye: +1.000.50x25, left eye: plano 1.00x145; lens: clear; ophthalmoscopy: mild pallor optic discs, severely attenuated vessels, preserved retinal pigment epithelium macular region with fibrosis inner limiting membrane, foveal cyst right eye, normal foveal reflex left eye, intraretinal hemorrhages and anomalies of the arterioles both eyes, retinal pigment epithelium atrophy in the periphery with intraretinal pigmentations; full-field electroretinogram: dark-adapted: no measurable isolated rod function; remnant of mixed responses; light-adapted: measurable but significantly reduced responses in single flash and 30 Hz with near normal implicit times; perimetry: constricted up to 10 degrees with large temporal and small nasal crescent both eyes; color vision test: right eye: (de)saturated normal, left eye: saturated normal; desaturated minor errors; optical coherence tomography: intact inner and outer segments in the macular region, foveal cyst right eye; thickened retinal layers superior and inferior of the macula; fundus autofluorescence: hyperfluorescent ring around the macula; fluorescein angiography: leakage along the superior and inferior vascular arcade and some staining at the fovea
2
1
LOVD
00409862
A-II:2
PubMed: Siemiatkowska 2013
family A, proband
F
-
Netherlands
white
-
-
-
-
retinal disease
best corrected visual acuity right, left eye: 20/25, 20/20; refraction right, left eye: +1.002.75x15, plano 1.00x135; Lens: posterior subcapsular cataract (trace); Ophthalmoscopy: moderate pallor optic discs, moderately attenuated vessels, preserved retinal pigment epithelium macula region with wrinkling inner limiting membrane, retinal pigment epithelium atrophy periphery with intraretinal pigmentations; Full-field electroretinogram, Dark-adapted: no measurable isolated rod function, remnant of mixed responses; Light-adapted: measurable but significantly reduced responses in single flash and 30 hz with prolonged implicit times; Perimetry: large mid-peripheral, absolute, annular scotoma both eyes; Color vision test: right eye: (de)saturated minor errors, no specific axis left eye: (de)saturated normal; Optical coherence tomography: intact inner and outer segments in the macular region; thickened retinal layers superior and inferior of the macula; fundus autofluorescence: hyperfluorescent ring around the macula; strabismus surgery at ages 5, 6, 7 yrs
2
1
LOVD
00409863
B-II:1
PubMed: Siemiatkowska 2013
family B, proband
M
-
Netherlands
white
-
-
-
-
retinal disease
subjectively no night blindness, but avoids driving at night; best corrected visual acuity right, left eye: 20/25 20/32; refraction right, left eye: +2.250.75x180, +0.750.25x180; lens: posterior subcapsular cataract (trace); Ophthalmoscopy: pink optic discs, mildly attenuated vessels, preserved retinal pigment epithelium posterior pole and macular region with subtle changes at fovea and mild fibrosis inner limiting membrane, retinal pigment epithelium atrophy in the midperiphery with intraretinal pigmentations (left eye >right eye); Full-field electroretinogram, Dark-adapted: measurable but reduced isolated rod and mixed responses with prolonged implicit times; Light-adapted: measurable but significantly reduced responses in single flash and 30 hz with prolonged implicit times; Perimetry: intact periphery (with v-4e target) with mid-peripheral sensitivity loss right eye, constricted up to 15-20 degrees left eye with large peripheral crescent; Color vision test: both eyes: (de)saturated major errors, no specific axis; Optical coherence tomography: intact inner and outer segments in the macular region, no thickening of retinal layers along the vascular arcade; fundus autofluorescence: hyperfluorescent ring around the macula; exotropia
1
1
LOVD
00447643
USHII-352
PubMed: Weisschuh 2024
family, 2 affected
F
-
Germany
-
-
-
-
-
?
-
1
2
Johan den Dunnen
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