Global Variome shared LOVD
PPFIA3 (protein tyrosine phosphatase, receptor type...)
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View all individuals with variants in gene PPFIA3
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View all diseases associated with gene PPFIA3
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All individuals with variants in gene PPFIA3
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
20 entries on 1 page. Showing entries 1 - 20.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00445147
Fam1Pat1
Journal: Paul 2024
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
white
>16y
-
-
-
NDD
see paper; ...; EEG abnormal; no autism, no autistic features; global delayed development, intellectual disability, epilepsy, strabismus, hypotonia, hyperreflexia, short stature, self-injurious behaviors, aggression, dysmorphisms
1
1
Johan den Dunnen
00445148
Fam2Pat2
Journal: Paul 2024
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
-
>13y
-
-
-
NDD
see paper; ...; EEG abnormal; no autism, no autistic features; delayed development, intellectual disability, epilepsy, strabismus, 27m-right cryptorchidism with orchiopexy, wide-based gait, dysarthric speech, dysmorphisms, abnormal MRI brain findings
1
1
Johan den Dunnen
00445149
Fam3Pat3
Journal: Paul 2024
2-generation family, 1 affected, unaffected non-carrier mother
F
-
-
white
>22y
-
-
-
NDD
see paper; ...; EEG abnormal; no autism, no autistic features; global developmental delay, spastic diplegic cerebral palsy, epilepsy, ataxic gait, dysarthria, urinary incontinence, scoliosis, facial dysmorphism; anterior pituitary insufficiency (most likely of ischemic origin) with central hypothyroidism, growth hormone deficiency with short stature, secondary adrenocortical insufficiency, hypogonadotropic hypogonadism, delayed puberty
1
1
Johan den Dunnen
00445150
Fam4Pat4
Journal: Paul 2024
2-generation family, 1 affected
F
-
-
white
>1y10m
-
-
-
NDD
see paper; ...; no epilepsy; global developmental delays, dysarthria, autistic features, hypotonia, astigmatism, constipation, dysmorphisms
1
1
Johan den Dunnen
00445151
Fam5Pat5
Journal: Paul 2024
2-generation family, affected, mother/daughter
F
-
-
white
>5y
-
-
-
NDD
see paper; ...; no epilepsy; no autism, no autistic features; global delayed development, intellectual disability, hyperreflexia, microcephaly (-3 SD), strabismus, facial features
1
1
Johan den Dunnen
00445152
Fam5Pat6
Journal: Paul 2024
mother
F
-
-
white
>35y
-
-
-
NDD
see paper; ...; no epilepsy; microcephaly (-2 SD), hyperthyroidism, history of miscarriages, intellectual disability
1
1
Johan den Dunnen
00445153
Fam6Pat7
Journal: Paul 2024
2-generation family, affected fetus, unaffected non-carrier parents
F
-
-
Latino
<0d
-
-
-
NDD
see paper; ..., deceased neonatally, genitourinary malformations, microcephaly, hypoglycemia, hydronephrosis, renal failure, newborn sepsis, feeding difficulties, dysmorphisms including anorectal malformations, absent bladder, bilateral cystic renal dysplasia, cloacal anomaly, anal atresia, ambiguous genitalia
1
1
Johan den Dunnen
00445154
Fam7Pat8
Journal: Paul 2024
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
Europe;Asia
>8y
-
-
-
NDD
see paper; ...; EEG abnormal; epilepsy; severe global delayed development, severe intellectual disability, macrocephaly, medically refractory epilepsy, dysmorphisms, dysarthria, dysphagia, congenital hypotonia, gastroesophageal reflux disease, constipation, motor stereotypies, mild tremor, infantile exotropia, delayed visual maturation, persistent sialorrhea, hydronephrosis, recurrent UTI’s, frequent pneumonia
1
1
Johan den Dunnen
00445155
Fam8Pat9
Journal: Paul 2024
2-generation family, 1 affected
F
-
-
Asia
>10y9m
-
-
-
NDD
see paper; ...; EEG abnormal; autistic features; dysmorphisms; intellectual disability, global delayed development, epilepsy, hypomimia, weak/absent cry, autistic features, nonverbal, nonambulatory, hypertonia, incontinence, strabismus, gastroesophageal reflux disease
1
1
Johan den Dunnen
00445156
Fam9Pat10
Journal: Paul 2024
2-generation family, affected fetus, unaffected non-carrier parents
F
-
-
white
<0d
-
-
-
NDD
see paper; ..., 27wg-fetus elective pregnancy termination, abnormal brain gyration, ventriculomegaly with a heart defect (thin aorta, left ventricle larger than right ventricle) ; esophageal atresia with esophago-tracheal fistula
1
1
Johan den Dunnen
00445157
Fam10Pat11
Journal: Paul 2024
2-generation family, 1 affected, unaffected non-carrier parents
M
-
Syria
Asia
>6y11m
-
-
-
NDD
see paper; ...; no epilepsy; autistic features improved over last few years; global delayed development, intellectual disability, mild dysmorphism
1
1
Johan den Dunnen
00445158
Fam11Pat12
Journal: Paul 2024
2-generation family, 1 affected, unaffected non-carrier parents
M
-
-
white
>11y
-
-
-
NDD
see paper; ...; EEG normal; no epilepsy; no dysmorphisms; global delayed development, intellectual disability, autism spectrum disorder, motor stereotypies, Pediatric Autoimmune Neuropsychiatric Disorders Associated with Streptococcal Infections, hematuria
1
1
Johan den Dunnen
00445159
Fam12Pat13
Journal: Paul 2024
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
white
>16y
-
-
-
NDD
see paper; ...; EEG abnormal; no autism, no autistic features; no dysmorphisms; intellectual disability, epilepsy, Landau Kleffner syndrome mild speech, constipation, thoracolumbar scoliosis, social delay
1
1
Johan den Dunnen
00445160
Fam13Pat14
Journal: Paul 2024
2-generation family, affected monozygotic twins, unaffected non-carrier parents
F
-
-
white
>5y
-
-
-
NDD
see paper; ...; no epilepsy; no dysmorphisms; speech delay, social delay, microcephaly, nonverbal, autism, mixed receptive-expressive language disorder, constipation, anxiety
1
1
Johan den Dunnen
00445161
Fam13Pat15
Journal: Paul 2024
twin
F
-
-
white
>5y
-
-
-
NDD
see paper; ...; no epilepsy; no autism, no autistic features; no dysmorphisms; gross motor delay, speech delay, speech apraxia, hypotonia, receptive-expressive language disorder, plagiocephaly, microcephaly, torticollis, constipation, migraines, motor apraxia, difficulty with depth perception
1
1
Johan den Dunnen
00445162
Fam14Pat16
Journal: Paul 2024
2-generation family, 1 affected
M
-
-
white
>23y
-
-
-
NDD
see paper; ...; global developmental delay, intellectual disability, hypotonia, autistic features, motor delay, motor incoordination, speech delay, hypermetropic, monocular exotropia, ADHD
1
1
Johan den Dunnen
00445163
Fam15Pat17
Journal: Paul 2024
2-generation family, 1 affected, unaffected non-carrier parents
F
-
-
white
>13y11m
-
-
-
NDD
see paper; ...; EEG abnormal; no epilepsy; global developmental delay, intellectual disability, speech delay, macrocephaly, dysarthria, hypotonia, autism, astigmatism, dysmorphisms
1
1
Johan den Dunnen
00445164
Fam16Pat18
Journal: Paul 2024
2-generation family, 1 affected
F
-
-
white
>9y9m
-
-
-
NDD
see paper; ...; EEG abnormal; no epilepsy; no autism, no autistic features; global delayed development, impulsive behavior, delayed speech, hypotonia, dysmorphisms including bilateral epicanthus vanished over years, right ear slightly different from left ear, protruding bilateral costal arch
1
1
Johan den Dunnen
00445165
Fam17Pat19
Journal: Paul 2024
2-generation family, affected mother/daughter, unaffected non-carrier parents
M
-
-
white
>7y8m
-
-
-
NDD
see paper; ...; EEG normal; no epilepsy; dysmorphisms; delayed attainment of developmental milestones, intellectual disability, speech delay, dysarthria, hypotonia, microcephaly, bilateral clinodactyly
1
1
Johan den Dunnen
00445166
Fam18Pat20
Journal: Paul 2024
2-generation family, 1 affected, unaffected carrier parents
M
-
-
white
>9y
-
-
-
NDD
see paper; ...; EEG abnormal; severe global developmental delay, intellectual disability, dystonic diplegia, dysarthria, hypotonia, epilepsy, dysmorphisms, microcephaly, autistic features, severe emotional lability, ataxic gait, lower limb hypertonia, strabismus, exotropia
2
1
Johan den Dunnen
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