Global Variome shared LOVD
PPP2R5D (protein phosphatase 2, regulatory subunit ...)
LOVD v.3.0 Build 30b [
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All individuals with variants in gene PPP2R5D
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
34 entries on 1 page. Showing entries 1 - 34.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00019889
-
PubMed: Gilissen 2014
-
?
?
-
-
-
-
-
-
ID
ID (dyshormonic profile; performal IQ 50, verbal 90), hypotonia, no facial dysmorphisms, progressive scoliosis, hip dysplasia, fatigue problems.
1
1
Marianne Vos (LOVD-team)
00050375
-
PubMed: DDDS 2015
,
Journal: DDDS 2015
family, 1 affected
F
-
United Kingdom (Great Britain)
-
-
-
Decipher
-
?
severe intellectual disability, hydrocephalus, chronic diarrhea, hypoglycemia
1
1
Johan den Dunnen
00050506
-
PubMed: DDDS 2015
,
Journal: DDDS 2015
family, 1 affected
M
-
United Kingdom (Great Britain)
-
-
-
Decipher
-
?
global developmental delay, seizures, ventriculomegaly, narrow forehead, downslanted palpebral fissures, pyloric stenosis, narrow palate, generalized hypotonia, macrocephaly, ventriculomegaly
1
1
Johan den Dunnen
00050643
-
PubMed: DDDS 2015
,
Journal: DDDS 2015
family, 1 affected
F
-
United Kingdom (Great Britain)
-
-
-
Decipher
-
?
global developmental delay, congenital muscular torticollis, congenital hip dislocation
1
1
Johan den Dunnen
00050675
-
PubMed: DDDS 2015
,
Journal: DDDS 2015
family, 1 affected
M
-
United Kingdom (Great Britain)
-
-
-
Decipher
-
?
global developmental delay, deeply set eye, abnormality of vision, myopia, strabismus, generalized hypotonia
1
1
Johan den Dunnen
00080819
-
PubMed: Trujillano 2017
unaffected non-carrier parents
-
-
-
-
-
-
-
-
HJS1;MRD35
Mental retardation, autosomal dominant 35 (OMIM:616355)
1
1
Daniel Trujillano
00183068
Trio72
PubMed: de Ligt 2012
-
M
-
Netherlands
-
-
-
-
-
ID
see paper; …
1
1
Johan den Dunnen
00306227
134
-
-
M
-
China
-
-
-
-
-
HJS1;MRD35
-
1
1
Sha Hong
00307963
15DG0837
PubMed: Anazi 2017
simplex case
F
-
-
-
-
-
-
-
ID
see paper; ..., Global developmental delay, Seizures, Macrocephaly, Prominent forehead, Generalized hypotonia, Downslanted palpebral fissures, Epicanthus, Anteverted nares, Cafe-au-lait spot
1
1
Johan den Dunnen
00319998
-
-
-
M
-
-
-
-
-
-
-
?
Abnormally large globe (HP:0001090); Muscular hypotonia (HP:0001252); Global developmental delay (HP:0001263)
1
1
IMGAG
00359336
163496
-
-
F
-
Hungary
-
-
-
-
-
HJS1;MRD35
exaggerated startle response, abnormality of movement
1
1
Andreas Laner
00427978
A029
PubMed: Bournazos 2022
family, 1 affected
-
-
Australia
-
-
-
-
-
?
-
1
1
Johan den Dunnen
00440416
PED2604.1
PubMed: Nambot 2018
-
-
-
France
-
-
-
-
-
?
-
1
1
Johan den Dunnen
00450288
COG1674
PubMed: Tatton-Brown 2017
patient
-
-
United States
-
-
-
-
-
?
overgrowth head; moderate intellectual disability;
1
1
Johan den Dunnen
00450289
COG1744
PubMed: Tatton-Brown 2017
patient
-
-
United States
-
-
-
-
-
?
overgrowth head, overgrowth height; moderate intellectual disability;
1
1
Johan den Dunnen
00450290
COG0328
PubMed: Tatton-Brown 2017
patient
-
-
United States
-
-
-
-
-
?
overgrowth head, overgrowth height; mild intellectual disability;
1
1
Johan den Dunnen
00455845
Pat85
PubMed: Salinas 2020
patient
F
-
-
-
-
-
-
-
?
-
1
1
Johan den Dunnen
00464343
-
-
-
-
-
-
-
-
-
-
-
HJS1;MRD35
-
1
1
Min Peng
00464344
-
-
-
-
-
-
-
-
-
-
-
HJS1;MRD35
-
1
1
Min Peng
00464472
COG1744
PubMed: Loveday 2015
2-generation family, 1 affected, unaffected non carrier parents
M
-
United Kingdom (Great Britain)
-
-
-
-
-
OGS
see paper; ..., birth weight 4300g (1.5SD), length 57cm (3SD), OFC 38.5cm (2.6SD); poor neonatal feeding; hypospadias meatus at glandular-shaft junction; 9m-delayed developmental milestones, poor head control, limited interaction; 3m-height 66cm (2.3SD), OFC 45.7cm (3.6SD), weight 7.65kg (1.8SD); telecanthus, long palpebral fissures, pencilled eyebrows, broad, high forehead, plagiocephaly, deep palma/plantar creases; intellectual disability
1
1
Johan den Dunnen
00464473
COG1674
PubMed: Loveday 2015
2-generation family, 1 affected, unaffected non carrier parents
M
-
United Kingdom (Great Britain)
-
-
-
-
-
OGS
see paper; ..., birth-36w; 20m-macrocephaly (OFC 54.5cm, 3.8SD), heigh 79.5cm (-1.4SD), weight 12.85kg (1.2SD); moderate intellectual disability; no dysmorphism, broad, tall forehead
1
1
Johan den Dunnen
00464474
COG0328
PubMed: Loveday 2015
2-generation family, 1 affected, unaffected parents
F
-
United Kingdom (Great Britain)
-
-
-
-
-
OGS
see paper; ..., birth at term, weight 3600g (0.4SD); hypotonia;delayed motor milestones, 15m-crawl, 2y-walk; 18m-OFC 52cm (3.4SD); 14y-height 173cm (2SD), OFC 60cm (3.8SD); mild intellectual disability; asymmetric resting tremor progressed to florid features of dopa responsive Parkinsonism
1
1
Johan den Dunnen
00464582
Pat1
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
M
-
-
-
-
-
-
-
ID
see paper; ..., severe intellectual disability, severe developmental delay
1
1
Johan den Dunnen
00464583
Pat2
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
F
-
-
-
-
-
-
-
ID
see paper; ..., severe intellectual disability, severe developmental delay
1
1
Johan den Dunnen
00464584
Pat3
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
M
-
-
-
-
-
-
-
ID
see paper; ..., severe intellectual disability, severe developmental delay
1
1
Johan den Dunnen
00464585
Pat4
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
F
-
-
-
-
-
-
-
ID
see paper; ..., severe intellectual disability, severe developmental delay
1
1
Johan den Dunnen
00464586
Pat5
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
M
-
-
-
-
-
-
-
ID
see paper; ..., severe intellectual disability, severe developmental delay
1
1
Johan den Dunnen
00464587
Pat6
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
M
-
-
-
-
-
-
-
ID
see paper; ..., severe intellectual disability, severe developmental delay
1
1
Johan den Dunnen
00464588
Pat7
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
F
-
-
-
-
-
-
-
ID
see paper; ..., severe intellectual disability, severe developmental delay
1
1
Johan den Dunnen
00464589
Pat8
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
F
-
-
-
-
-
-
-
ID
see paper; ..., mild intellectual disability, mild developmental delay
1
1
Johan den Dunnen
00464590
Pat9
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
F
-
-
-
-
-
-
-
ID
see paper; ..., mild intellectual disability, mild developmental delay
1
1
Johan den Dunnen
00464591
Pat10
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
F
-
-
-
-
-
-
-
ID
see paper; ..., moderate intellectual disability, moderate developmental delay
1
1
Johan den Dunnen
00464592
Pat11
PubMed: Houge 2015
2-generation family, 1 affected, unaffected non carrier parents
F
-
-
-
-
-
-
-
ID
see paper; ..., moderate intellectual disability, moderate developmental delay
1
1
Johan den Dunnen
00471301
IS-DYS-402
PubMed: Zech 2020
2-generation family, 1 affected, unaffected non-carrier parents
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DYT
isolated dystonia, coexisting non-movement disorder-related neurological symptoms; onset infancy (0-2y); generalized dystonia; no dystonic cerebral palsy
1
1
Johan den Dunnen
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