Global Variome shared LOVD
RD3 (retinal degeneration 3)
LOVD v.3.0 Build 30b [
Current LOVD status
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All individuals with variants in gene RD3
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
43 entries on 1 page. Showing entries 1 - 43.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00059925
-
PubMed: De Castro-Miró 2014
family, 4 patients
M
?
Spain
-
-
-
-
-
RP
-
1
4
Marta de Castro-Miró
00077971
-
PubMed: Jinda 2014
-
M
?
Thailand
?
-
-
-
-
retinal disease
retinitis pigmentosa; At 30 years of age: Pink optic disc; generalized RPE changes without macular involvement; moderate bone spicules. Best corrected visual acuity: OD 6/6, OS 6/9.
1
1
Stéphanie Cornelis
00100088
PKRD141;61141
PubMed: Li 2017
-
F
yes
Pakistan
Pakistani
-
-
-
-
RD
-
1
1
James Hejtmancik
00144156
-
PubMed: Katagiri 2014
index patient
F
no
Japan
Japanese
-
-
-
-
retinal disease
-
1
1
Rob W.J. Collin
00144252
-
PubMed: Eisenberger 2014
index patient
M
no
Germany
-
-
-
-
-
retinal disease
-
1
1
Rob W.J. Collin
00289682
-
PubMed: Narang 2020
,
Journal: Narang 2020
analysis 2794 individuals (India)
-
-
India
-
-
-
-
-
?
-
1
53
Mohammed Faruq
00325487
3580
PubMed: Zenteno 2020
single patient
-
-
Mexico
-
-
-
-
-
retinal disease
retinitis pigmentosa
1
1
Johan den Dunnen
00332185
JB320
PubMed: Bryant 2018
-
-
-
United States
-
-
-
-
-
retinal disease
-
2
1
LOVD
00332210
JB284
PubMed: Bryant 2018
-
-
-
United States
-
-
-
-
-
retinal disease
-
2
1
LOVD
00333357
Pat6
PubMed: Costa 2017
-
M
-
Brazil
-
-
-
-
-
retinal disease
see paper; ...
1
1
LOVD
00358919
Fam31
PubMed: Wang 2016
family, 1 affected, unaffected heterozygous carrier parents/relatives
-
-
China
Han
-
-
-
-
retinal disease
see paper; ...
2
1
LOVD
00372445
152
PubMed: Wang 2015
index case
-
-
China
-
-
-
-
-
retinal disease
see paper; ...
2
1
LOVD
00372481
159
PubMed: Wang 2015
index case
-
-
China
-
-
-
-
-
retinal disease
see paper; ...
1
1
LOVD
00377519
EYE47
PubMed: Hosono 2018
proband, family EYE47
F
no
Japan
Asian
-
-
-
-
retinal disease
see paper
1
1
LOVD
00381594
-
PubMed: Eisenberger-2013
-
M
?
Germany
-
-
-
-
-
retinal disease
-
1
1
LOVD
00381942
11
PubMed: Weisschuh 2018
-
F
-
Germany
-
-
-
-
-
retinal disease
BCVA OD-OS:light perception; nystagmus; ; cataract
1
1
LOVD
00385617
83RE
PubMed: de Castro-Miró-2014
-
M
-
-
-
-
-
-
-
retinal disease
-
1
4
LOVD
00386205
RPN-325
PubMed: Rodriguez-Munoz 2020
-
?
-
Spain
-
-
-
-
-
retinal disease
-
1
1
LOVD
00388853
137
PubMed: Weisschuh 2020
Filing key number: 59, Leber congenital amaurosis, no patient Ids, consecutive numbers given
F
-
Germany
-
-
-
-
-
retinal disease
age at genetic diagnosis mentioned
1
1
LOVD
00388993
277
PubMed: Weisschuh 2020
Filing key number: 92, Leber congenital amaurosis, no patient Ids, consecutive numbers given
F
-
Germany
-
-
-
-
-
retinal disease
age at genetic diagnosis mentioned
1
1
LOVD
00388994
278
PubMed: Weisschuh 2020
Filing key number: 92, Leber congenital amaurosis, no patient Ids, consecutive numbers given
F
-
Germany
-
-
-
-
-
retinal disease
age at genetic diagnosis mentioned
1
1
LOVD
00388995
279
PubMed: Weisschuh 2020
Filing key number: 92, Leber congenital amaurosis, no patient Ids, consecutive numbers given
M
-
Germany
-
-
-
-
-
retinal disease
age at genetic diagnosis mentioned
1
1
LOVD
00391584
83
PubMed: Hull 2020
-
?
-
New Zealand
Pacific
-
-
-
-
retinal disease
-
1
1
LOVD
00408919
-
PubMed: Friedman-2005
-
-
-
India
-
-
-
-
-
retinal disease
acular changes with atrophy and spicular pigment in the midperiphery. VA was reduced to 20/200, with central scotoma in both eyes
1
1
LOVD
00408920
-
PubMed: Friedman-2006
-
F
-
United States
American
-
-
-
-
retinal disease
-
4
1
LOVD
00408921
-
PubMed: Friedman-2006
-
F
-
United States
American
-
-
-
-
retinal disease
round atrophic lesions in both maculae, cellophane-like sheen and atrophy in the other regions of the posterior poles. CRD pattern, with cone ERG b-wave amplitudes at about one-third of normal and rod ERG amplitudes at ?80% of normal levels
1
1
LOVD
00408922
-
PubMed: Friedman-2006
-
F
-
-
Scandinavian
-
-
-
-
retinal disease
atrophic lesions in both maculae, and there was a cellophane-like sheen and atrophy in the other regions of the posterior poles see paper
1
1
LOVD
00408923
Fam0659: 1,2,4,5,7,10
PubMed: Preising-2012
-
-
yes
-
Kurdish
-
-
-
-
retinal disease
-
1
6
LOVD
00408924
NEM1/II1
PubMed: perrault-2013
-
F
yes
Morocco
-
-
-
-
-
retinal disease
Macular rearrangement, With abnormal macular pigmentation with starshape Diffuse salt and pepper aspect, thin vessels . Nystagmus since birth,no ocular pursuit, altered pupillary reflexes
1
1
LOVD
00408925
NEM2/II1
PubMed: perrault-2013
-
F
yes
Morocco
-
-
-
-
-
retinal disease
Nystagmus since birth altered pupillary reflexes, Keratoconus
1
1
LOVD
00408926
NEM2/II2
PubMed: perrault-2013
-
F
yes
-
-
-
-
-
-
retinal disease
Nystagmus since birth, altered pupillary reflexes
1
1
LOVD
00408927
NEM3/II2
PubMed: perrault-2013
-
F
yes
Lebanon
-
-
-
-
-
retinal disease
Salt and pepper retina, thin vessels, marked macular atrophy. Nystagmus at birth, DOSF
1
1
LOVD
00408928
NEM3/II3
PubMed: perrault-2013
-
F
yes
-
-
-
-
-
-
retinal disease
-
1
1
LOVD
00408929
NEM3/II4
PubMed: perrault-2013
-
M
yes
-
-
-
-
-
-
retinal disease
-
1
1
LOVD
00408930
NEM4/II1
PubMed: perrault-2013
-
F
yes
Turkey
-
-
-
-
-
retinal disease
Macular rearrangement, thin retinal vessels, dull retina with no pigmentary migrations.
1
1
LOVD
00408931
NEM4/II2
PubMed: perrault-2013
-
F
yes
Turkey
-
-
-
-
-
retinal disease
Macular rearrangement, thin retinal vessels, dull retina with no pigmentary migrations.
1
1
LOVD
00408932
F16338/LCA59-2-94
PubMed: perrault-2013
-
F
yes
Turkey
-
-
-
-
-
retinal disease
Macular atrophy, RPE atrophy with salt and pepper aspect, some bone-spicule pigmentin the mid periphery. Nystagmus since birth, altered papillary reflexes
1
1
LOVD
00408933
NEM5/II1
PubMed: perrault-2013
-
F
yes
Algeria
-
-
-
-
-
retinal disease
Macular rearrangement (4 yrs), thin retinal vessels, dull retina with no pigmentarymigrations . Nystagmus since birth, no ocular pursuit, altered pupillary reflexes
1
1
LOVD
00408934
FJC/
PubMed: perrault-2013
-
F
yes
Mexico
-
-
-
-
-
retinal disease
-
1
1
LOVD
00408935
-
PubMed: dikkaya-2020
-
M
-
-
-
-
-
-
-
retinal disease
Welldemarcated central foveal atrophy , perifoveal hyperautofluorescent ring and irregular hyperautofluorescence outside the vascular arcade. An arrest in foveal development and loss of outer retinal structure including outer nuclear layer, external limiting membrane, ellipsoid zone and interdigitation zone at the fovea.
1
1
LOVD
00447651
ARRP-301
PubMed: Weisschuh 2024
family, 2 affected
F
-
Germany
-
-
-
-
-
?
-
1
2
Johan den Dunnen
00447687
OAK-745
PubMed: Weisschuh 2024
patient, no family history
F
-
Germany
-
-
-
-
-
?
-
1
1
Johan den Dunnen
00451541
FamCPatIV5
PubMed: Basharat 2024
sister
F
yes
Pakistan
-
-
-
-
-
?
no night vision; no perception light; no nystagmus; corneal haze left eye; no photophobia; bilateral microcornea
1
1
Rabia Basharat
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