Global Variome shared LOVD
RPS6KC1 (ribosomal protein S6 kinase, 52kDa, polype...)
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All individuals with variants in gene RPS6KC1
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
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!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
14 entries on 1 page. Showing entries 1 - 14.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00467763
Fam1PatII1
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
2-generation family, 1 affected, unaffected heterozygous carrier parents
F
no
Italy
-
-
-
-
-
NDD
see paper; ..., mild development delay; 16m-walk; no regression; neonatal hypotonia; no motor signs; no epilepsy; no dysmorphism; mild intellectual disability; repetitive behavior, occasionally aggressive; MRI brain 10y2m WM volume loss, thin corpus callosum, enlarged cisterna magna
1
1
Johan den Dunnen
00467764
Fam2PatII1
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
2-generation family, 5 affected (4F, M) and three stillborns, unaffected heterozygous carrier parents
M
-
Finland
-
-
-
-
-
NDD
see paper; ..., mild development delay; 18m-walk; no regression; no neonatal hypotonia; spastic paraplegia; epilepsy; dysmorphism (long face, long philtrum, thin upper lip, prominent forehead, hypotelorism, single median maxillary incisor); moderate intellectual disability; autistic traits, depressive disorder; strabismus (operated), scoliosis
1
5
Johan den Dunnen
00467765
Fam2PatII5
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
sister
F
-
Finland
-
-
-
-
-
NDD
see paper; ..., mild development delay; 16m-walk; no regression; neonatal hypotonia; spastic paraplegia; no epilepsy; dysmorphism (long face, long philtrum, thin upper lip, hypotelorism, prominent maxillary incisor, convergent strabismus, anteverted nares, low-set, posteriorly rotated ears); moderate intellectual disability; normal behavior; 40y-cognitive decline
1
1
Johan den Dunnen
00467766
Fam2PatII6
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
sister
F
-
Finland
-
-
-
-
-
NDD
see paper; ..., mild development delay; 18m-walk; no regression; neonatal hypotonia; no motor signs; no epilepsy; dysmorphism (long face, long philtrum, thin upper lip, prominent forehead, retrognathia, hypotelorism, prominent maxillary incisor, low-set, posteriorly rotated ears); moderate intellectual disability; anxiety disorder, attention-defi- cient hyperactive disorder; normal CT scan
1
1
Johan den Dunnen
00467767
Fam2PatII11
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
sister
F
-
Finland
-
-
-
-
-
NDD
see paper; ..., mild development delay; 14m-walk; no regression; neonatal hypotonia; no motor signs; epilepsy; dysmorphism (long face, hypotelorism, prominent maxillary incisor, convergent strabismus, anteverted nares, low-set, posteriorly rotated ears); moderate intellectual disability; normal behavior; strabismus; normal CT scan
1
1
Johan den Dunnen
00467768
Fam3PatII6
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
2-generation family, 3 affected sisters (+ three miscarriages), unaffected heterozygous carrier parents
F
yes
United Kingdom (Great Britain)
Iran
-
-
-
-
NDD
see paper; ..., no development delay; 13m-walk; no regression; no neonatal hypotonia; hyperreflexia; epilepsy; dysmorphism (prominent nose, deep-set eyes); no intellectual disability; anxiety disorder; tremor, mitral valve prolapse; MRI brain 6y-mild WM volume loss, thin corpus callosum, brainstem hypoplasia
1
3
Johan den Dunnen
00467769
Fam4PatII1
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
2-generation family, 1 affected, unaffected heterozygous carrier parents
M
no
Spain
-
-
-
-
-
NDD
see paper; ..., mild development delay; 18m-walk; no regression; neonatal hypotonia; spastic tetraplegia; isolated seizure; dysmorphism (long face, prominent forehead, retrognathia, sthenic body habitus, scoliosis, lumbar hyperlordosis, pes cavus); mild intellectual disability; autistic traits, winging movements; peripheral axonal neuropathy, scoliosis; MRI brain 15y-posterior WM volume loss with colpocephaly, corpus callosum hypoplasia of body and splenium, cerebellar vermis hypoplasia
2
1
Johan den Dunnen
00467770
Fam5PatII3
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
2-generation family, 1 affected fetus (several failed in vitro fertilizations), unaffected heterozygous carrier parents
F
no
Estonia
-
<0d
-
-
-
NDD
see paper; ..., 19wg-termination pregnancy; dysmorphism (extensive fetal hydrops, short neck, broad neck, downslanted palpebral fissures, low-set ears; prominent clitoris); extensive fetal hydrops
2
1
Johan den Dunnen
00467771
Fam6PatII1
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
2-generation family, 1 affected, unaffected heterozygous carrier parents
F
yes
Turkey
-
-
-
-
-
NDD
see paper; ..., moderate development delay; 12m-walk; no regression; no neonatal hypotonia; mild distal weakness, hyperreflexia; isolated seizure; dysmorphism (prominent forehead, downslanted palpebral fissures, bilateral ptosis, high-arched palate, retrognathia, low-set, posteriorly rotated ears); moderate intellectual disability; shyness, asociality; tremor, ataxic gait, ocular apraxia; MRI brain 40y-WM volume loss, thin corpus callosum, mild cerebellar vermis atrophy
1
1
Johan den Dunnen
00467772
Fam7PatII2
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
2-generation family, 3 affected (2F, M), unaffected heterozygous carrier parents
M
no
-
Asia
-
-
-
-
NDD
see paper; ..., moderate development delay; independent walking; 7y-regression; no neonatal hypotonia; spastic paraplegia, muscle weakness, hyperreflexia; occasional seizures; dysmorphism; moderate intellectual disability; aggressive behavior; tremor, ataxic gait, dystonia, myoclonus
1
3
Johan den Dunnen
00467773
Fam7PatII3
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
sister
F
no
-
Asia
-
-
-
-
NDD
see paper; ..., moderate development delay; independent walking; 8y-regression; no neonatal hypotonia; muscle weakness, hyperreflexia; occasional seizures; dysmorphism; moderate intellectual disability; aggressive behavior; tremor, slight gait abnormality
1
1
Johan den Dunnen
00467774
Fam8PatII2
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
2-generation family, affected brother/sister, unaffected heterozygous carrier parents
M
yes
Iran
-
-
-
-
-
NDD
see paper; ..., moderate development delay; independent walking; no regression; no neonatal hypotonia; spastic paraplegia, muscle weakness, hyperreflexia; no epilepsy; no dysmorphism; moderate intellectual disability; normal behavior; scoliosis; convergent strabismus
1
2
Johan den Dunnen
00467775
Fam8PatII3
PubMed: Planas-Serra 2025
,
Journal: Planas-Serra 2025
sister
F
yes
Iran
-
-
-
-
-
NDD
see paper; ..., moderate development delay; independent walking; no regression; no neonatal hypotonia; spastic paraplegia, muscle weakness, hyperreflexia; no epilepsy; no dysmorphism; moderate intellectual disability; normal behavior; scoliosis; convergent strabismus
1
1
Johan den Dunnen
00467797
Fam025PatBAB6797
PubMed: Charng 2016
2-generation family, 1 affected, unaffected heterozygous carrier parents
F
yes
Saudi Arabia
-
-
-
-
-
NDD
developmental delay, white matter volume loss, thin corpus callosum, periventricular leukomalacia, delayed myelination, axial hypotonia
2
1
Johan den Dunnen
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