Global Variome shared LOVD
UBAP1L (ubiquitin associated protein 1-like)
LOVD v.3.0 Build 30b [
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Global Variome, with Curator vacancy
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All individuals with variants in gene UBAP1L
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
ID_report
: ID of the individual that can be publically shared, e.g. as listed in a publication
Reference
: reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, incl. link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346"
Remarks
: remarks about the individual
Gender
: gender individual
All options:
? = unknown
- = not applicable
F = female
M = male
rF = raised as female
rM = raised as male
Consanguinity
: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown)
All options:
no = non-consanguineous parents
yes = consanguineous parents
likely = consanguinity likely
? = unknown
- = not applicable
Country
: where (country) does the individual live/recently came from. Give additional details (population, specific sub-group) and when parents come from different countries in "Population". Belgium = individual lives in/recently came from Belgium, (France) = reported by laboratory in France, individual's country of origin not sure
All options:
? (unknown)
- (not applicable)
Afghanistan
(Afghanistan)
Albania
(Albania)
Algeria
(Algeria)
American Samoa
(American Samoa)
Andorra
(Andorra)
Angola
(Angola)
Anguilla
(Anguilla)
Antarctica
(Antarctica)
Antigua and Barbuda
(Antigua and Barbuda)
Argentina
(Argentina)
Armenia
(Armenia)
Aruba
(Aruba)
Australia
(Australia)
Austria
(Austria)
Azerbaijan
(Azerbaijan)
Bahamas
(Bahamas)
Bahrain
(Bahrain)
Bangladesh
(Bangladesh)
Barbados
(Barbados)
Belarus
(Belarus)
Belgium
(Belgium)
Belize
(Belize)
Benin
(Benin)
Bermuda
(Bermuda)
Bhutan
(Bhutan)
Bolivia
(Bolivia)
Bosnia and Herzegovina
(Bosnia and Herzegovina)
Botswana
(Botswana)
Bouvet Island
(Bouvet Island)
Brazil
(Brazil)
British Indian Ocean Territory
(British Indian Ocean Territory)
Brunei Darussalam
(Brunei Darussalam)
Bulgaria
(Bulgaria)
Burkina Faso
(Burkina Faso)
Burundi
(Burundi)
Cambodia
(Cambodia)
Cameroon
(Cameroon)
Canada
(Canada)
Cape Verde
(Cape Verde)
Cayman Islands
(Cayman Islands)
Central African Republic
(Central African Republic)
Central Europe
Chad
(Chad)
Chile
(Chile)
China
(China)
Christmas Island
(Christmas Island)
Cocos (Keeling Islands)
(Cocos (Keeling Islands))
Colombia
(Colombia)
Comoros
(Comoros)
Congo
(Congo)
Cook Islands
(Cook Islands)
Costa Rica
(Costa Rica)
Cote D'Ivoire (Ivory Coast)
(Cote D'Ivoire (Ivory Coast))
Croatia (Hrvatska)
(Croatia (Hrvatska))
Cuba
(Cuba)
Cyprus
(Cyprus)
Czech Republic
(Czech Republic)
Denmark
(Denmark)
Djibouti
(Djibouti)
Dominica
(Dominica)
Dominican Republic
(Dominican Republic)
East Timor
(East Timor)
Ecuador
(Ecuador)
Egypt
(Egypt)
El Salvador
(El Salvador)
England
(England)
Equatorial Guinea
(Equatorial Guinea)
Eritrea
(Eritrea)
Estonia
(Estonia)
Ethiopia
(Ethiopia)
Falkland Islands (Malvinas)
(Falkland Islands (Malvinas))
Faroe Islands
(Faroe Islands)
Fiji
(Fiji)
Finland
(Finland)
France
(France)
Gabon
(Gabon)
Gambia
(Gambia)
Georgia
(Georgia)
Germany
(Germany)
Ghana
(Ghana)
Gibraltar
(Gibraltar)
Greece
(Greece)
Greenland
(Greenland)
Grenada
(Grenada)
Guadeloupe
(Guadeloupe)
Guam
(Guam)
Guatemala
(Guatemala)
Guiana, French
(Guiana, French)
Guinea
(Guinea)
Guinea-Bissau
(Guinea-Bissau)
Guyana
(Guyana)
Haiti
(Haiti)
Heard and McDonald Islands
(Heard and McDonald Islands)
Honduras
(Honduras)
Hong Kong
(Hong Kong)
Hungary
(Hungary)
Iceland
(Iceland)
India
(India)
Indonesia
(Indonesia)
Iran
(Iran)
Iraq
(Iraq)
Ireland
(Ireland)
Israel
(Israel)
Italy
(Italy)
Jamaica
(Jamaica)
Japan
(Japan)
Jordan
(Jordan)
Kazakhstan
(Kazakhstan)
Kenya
(Kenya)
Kiribati
(Kiribati)
Korea
(Korea)
Korea, North (People's Republic)
(Korea, North (People's Republic))
Korea, South (Republic)
(Korea, South (Republic))
Kosovo
(Kosovo)
Kuwait
(Kuwait)
Kyrgyzstan (Kyrgyz Republic)
(Kyrgyzstan (Kyrgyz Republic))
Laos
(Laos)
Latvia
(Latvia)
Lebanon
(Lebanon)
Lesotho
(Lesotho)
Liberia
(Liberia)
Libya
(Libya)
Liechtenstein
(Liechtenstein)
Lithuania
(Lithuania)
Luxembourg
(Luxembourg)
Macau
(Macau)
Macedonia
(Macedonia)
Madagascar
(Madagascar)
Malawi
(Malawi)
Malaysia
(Malaysia)
Maldives
(Maldives)
Mali
(Mali)
Mallorca
(Mallorca)
Malta
(Malta)
Marshall Islands
(Marshall Islands)
Martinique
(Martinique)
Mauritania
(Mauritania)
Mauritius
(Mauritius)
Mayotte
(Mayotte)
Mexico
(Mexico)
Micronesia
(Micronesia)
Moldova
(Moldova)
Monaco
(Monaco)
Mongolia
(Mongolia)
Montserrat
(Montserrat)
Morocco
(Morocco)
Mozambique
(Mozambique)
Myanmar
(Myanmar)
Namibia
(Namibia)
Nauru
(Nauru)
Nepal
(Nepal)
Netherlands
(Netherlands)
Netherlands Antilles
(Netherlands Antilles)
Neutral Zone (Saudia Arabia/Iraq)
(Neutral Zone (Saudia Arabia/Iraq))
New Caledonia
(New Caledonia)
New Zealand
(New Zealand)
Nicaragua
(Nicaragua)
Niger
(Niger)
Nigeria
(Nigeria)
Niue
(Niue)
Norfolk Island
(Norfolk Island)
Northern Ireland
(Northern Ireland)
Northern Mariana Islands
(Northern Mariana Islands)
Norway
(Norway)
Oman
(Oman)
Pakistan
(Pakistan)
Palau
(Palau)
Palestine
(Palestine)
Panama
(Panama)
Papua New Guinea
(Papua New Guinea)
Paraguay
(Paraguay)
Peru
(Peru)
Philippines
(Philippines)
Pitcairn
(Pitcairn)
Poland
(Poland)
Polynesia, French
(Polynesia, French)
Portugal
(Portugal)
Puerto Rico
(Puerto Rico)
Qatar
(Qatar)
Reunion
(Reunion)
Romania
(Romania)
Russia
(Russia)
Russian Federation
(Russian Federation)
Rwanda
(Rwanda)
S. Georgia and S. Sandwich Isls.
(S. Georgia and S. Sandwich Isls.)
Saint Kitts and Nevis
(Saint Kitts and Nevis)
Saint Lucia
(Saint Lucia)
Saint Vincent and The Grenadines
(Saint Vincent and The Grenadines)
Samoa
(Samoa)
San Marino
(San Marino)
Sao Tome and Principe
(Sao Tome and Principe)
Saudi Arabia
(Saudi Arabia)
Scotland
(Scotland)
Senegal
(Senegal)
Serbia
(Serbia)
Seychelles
(Seychelles)
Sierra Leone
(Sierra Leone)
Singapore
(Singapore)
Slovakia (Slovak Republic)
(Slovakia (Slovak Republic))
Slovenia
(Slovenia)
Solomon Islands
(Solomon Islands)
Somalia
(Somalia)
South Africa
(South Africa)
Southern Territories, French
(Southern Territories, French)
Soviet Union (former)
(Soviet Union (former))
Spain
(Spain)
Sri Lanka
(Sri Lanka)
St. Helena, Ascension and Tristan da
Cunha
(St. Helena, Ascension and Tristan da
Cunha)
St. Pierre and Miquelon
(St. Pierre and Miquelon)
Sudan
(Sudan)
Sudan, South
(Sudan, South)
Suriname
(Suriname)
Svalbard and Jan Mayen Islands
(Svalbard and Jan Mayen Islands)
Swaziland
(Swaziland)
Sweden
(Sweden)
Switzerland
(Switzerland)
Syria
(Syria)
Taiwan
(Taiwan)
Tajikistan
(Tajikistan)
Tanzania
(Tanzania)
Thailand
(Thailand)
Togo
(Togo)
Tokelau
(Tokelau)
Tonga
(Tonga)
Trinidad and Tobago
(Trinidad and Tobago)
Tunisia
(Tunisia)
Turkey
(Turkey)
Turkmenistan
(Turkmenistan)
Turks and Caicos Islands
(Turks and Caicos Islands)
Tuvalu
(Tuvalu)
Uganda
(Uganda)
Ukraine
(Ukraine)
United Arab Emirates
(United Arab Emirates)
United Kingdom (Great Britain)
(United Kingdom (Great Britain))
United States
(United States)
Uruguay
(Uruguay)
US Minor Outlying Islands
(US Minor Outlying Islands)
Uzbekistan
(Uzbekistan)
Vanuatu
(Vanuatu)
Vatican City State (Holy See)
(Vatican City State (Holy See))
Venezuela
(Venezuela)
Viet Nam
(Viet Nam)
Virgin Islands (British)
(Virgin Islands (British))
Virgin Islands (US)
(Virgin Islands (US))
Wales
(Wales)
Wallis and Futuna Islands
(Wallis and Futuna Islands)
Western Sahara
(Western Sahara)
Yemen
(Yemen)
Yugoslavia
(Yugoslavia)
Zaire
(Zaire)
Zambia
(Zambia)
Zimbabwe
(Zimbabwe)
Population
: population the individual (or ancestors) belongs to; e.g. white, gypsy, Jewish-Ashkenazi, Africa-N, Sardinia, etc.
Age at death
: age at which the individual deceased (when applicable):
35y = 35 years
>43y = still alive at 43y
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
VIP
: individual/phenotype VIP-status was requested for matchmaking - need collaboration(s) to crack the case - please contact the submitter/curator. NOTE: to get VIP status ask the curator.
Data_av
: are additional data available upon request: e.g. pedigree (yes/no/?)
Treatment
: treatment of patient
Variants in genes
: The individual has variants for this gene.
Panel size
: Number of individuals this entry represents; e.g. 1 for an individual, 5 for a family with 5 affected members.
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Example
Matches
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Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
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Date
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all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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15 entries on 1 page. Showing entries 1 - 15.
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Legend
How to query
Individual ID
ID_report
Reference
Remarks
Gender
Consanguinity
Country
Population
Age at death
VIP
Data_av
Treatment
Disease
Phenotype details
Variants
Panel size
Owner
00447995
FamIPatIII1
Han 2024, submitted
3-generation family, affected brother sister, unaffected parents
M
-
Hungary
-
-
-
-
-
retinal disease
see paper; ..., 25y-abnormal retinal findings (incidental; nyctalopia, VA loss, 33y-color vision deficit; refraction OD -11.0/+1.00x120, OS -10/+1.5x65; best corrected visual acuity OU 20/32 (25y), OU 20/50 (33y), OD 20/60; OS 20/50 (37y); 25y-Goldmann VF (OU) ring scotoma;37y-Goldmann VF (OU) about 8 degrees remaining, temporal crescent island (V4e target); 25y-bone spicule pigment deposits in the mid-periphery; 33y-OCT (OU) visible photoreceptors central macula; 37y-OCT (OU) bruch membrane ruptures posterior pole; 38y-OCT (OU) small intact central island; full field ERG 25y-extinguished rod and diminished cone responses; 25y-faint posterior subcapsular cataracts; Cambridge Colour Test measurable protan and deutan thresholds with abolished tritan thresholds
1
2
Susanne Roosing
00447996
FamIPatIII2
Han 2024, submitted
sister
F
-
Hungary
-
-
-
-
-
retinal disease
see paper; ..., 30y-abnormal full-field ERG; refraction OD -7.0/0.0, OS -9.0/0.0; best corrected visual acuity OU 20/20 (30y); full field ERG 30y-abnormal rod and cone responses
1
1
Susanne Roosing
00447997
FamIIPatII2
Han 2024, submitted
3-generation family, 3 affected sibs (F, 2M), unaffected parents
M
-
United States
-
-
-
-
-
retinal disease
see paper; ..., 38y-nyctalopia, VA loss, photo-aversion OS; prior retinal detachments OD; refraction highly myopic; best corrected visual acuity OD no light perception (phthisis), OS 20/500 (38y); 38y-kinetic VF (OS) two temporal crescent islands (V4e target); 38y-static VF (OS) severely decreased sensitivity; 38y-pale disc, retinal vessel attenuation, macular and mid-peripheral atrophy with few bone spicules; 38y-OCT (OS) Loss of outer retinal structure, ERM, SHRM, choroidal atrophy; 38y-FA (OS) arm-to-eye time 35 sec, no vasculitis or disc leakage
1
1
Susanne Roosing
00447998
FamIIIPatIII1
Han 2024, submitted
4-generation family, 1 affected, unaffected parents
M
-
Israel
Africa-N;jew
-
-
-
-
retinal disease
see paper; ..., 22y-nyctalopia; best corrected visual acuity OU 20/30 (30y, OU hand motion (54y); 35y-Goldmann VF (OU about 5 central degrees remaining; 54y-waxy pallor optic nerve head, attenuation retinal vessels, confluent pigment changes in mid-periphery, macular atrophy; full field ERG 30y-diminished cone and rod waves; 30y-color vision abnormalities
1
1
Susanne Roosing
00447999
FamIVPatII1
Han 2024, submitted
2-generation family, 1 affected, unaffected parents
F
yes
Israel
Arab;Muslim
-
-
-
-
retinal disease
see paper; ..., refraction OD -4.25/-0.50x132, OS -4.25/-1x55; best corrected visual acuity OU counting fingers (49y); 49y-pale discs with macular scars without bone spicules; full field ERG 49y-reduced rod and cone responses
1
1
Susanne Roosing
00448000
FamVPatII2
Han 2024, submitted
3-generation family, 1 affected, unaffected parents
F
-
Israel
jew-Ashkenazi
-
-
-
-
retinal disease
see paper; ..., 51y-nyctalopia, peripheral vision difficulties; best corrected visual acuity OD 20/50 OS 20/25 (57y); 61y-Goldmann VF (OU) reduced extent (V4e and III4e targets) with greater loss of nasal field; 61y-pigment accumulation retinal midperiphery; 61y-OCT (OU) central island outer nuclear layer that abnormally declined in thickness with eccentricity; 61y-short-wavelength FAF (OU) diffuse RPE pathology; full field ERG 61y-reduced rod and cone responses
1
1
Susanne Roosing
00448001
FamVIPatII2
Han 2024, submitted
3-generation family, affected brother sister, unaffected parents
M
-
Israel
Africa-N;jew
-
-
-
-
retinal disease
see paper; ..., 60y-retinal degeneration OU found at the same time as retinal detachment OD; best corrected visual acuity OS 20/25 (62y); static VF (OS) marked narrowing; 62y-extensive bone-spicule–like pigment retinal periphery; 62y-OCT (OU) thinned outer nuclear layer abnormally declining in thickness with increasing eccentricity fovea; 62y-short-wavelength FAF (OU) diffuse RPE pathology with relative sparing superior sector posterior pole; full field ERG 62y-not recordable rod and cone responses; 60y-retinal detachment OD
1
2
Susanne Roosing
00448002
FamVIPatII3
Han 2024, submitted
sister
F
-
Israel
Africa-N;jew
-
-
-
-
retinal disease
see paper; ..., 40y-nyctalopia; refraction OD -5.0/-4.00x5, OS -3.25/-4.50x50; best corrected visual acuity OU 20/63 (50y); 50y-GVF (OU) constricted (V4e and I4e targets); full field ERG 50y-diminished cone and rod responses
1
1
Susanne Roosing
00448003
FamVIIPatII2
Han 2024, submitted
2-generation family, 1 affected, unaffected parents
M
-
Israel
Arab;Christian
-
-
-
-
retinal disease
see paper; ..., color vision deficiency since childhood with progressive deterioration; 15-glasses for mild-moderate myopia; initially good BCVA, in late twenties BCVA began to decline, with a more severe drop between the ages of 30y-37y; refraction OD -3.00/-1.25x41, OS -2.50/- 1.00x15; best corrected visual acuity OU 20/32 (30y), OU 20/63 (35y), OU 20/100 (37y); 30y-small central scotoma both eyes correlates with OCT findings, 31y-similar to previous with slight enlargement of affected area; 30y-mild Bull’s eye maculopathy with central macular atrophy and pigmentary changes in fovea and parafovea, attenuated vessels, no peripheral pigmentary changes, no bone-spicule–like pigment; full field ERG 30y-markedly reduced and delayed cone responses with borderline normal rod responses; 35y-further reduction cone function (from 20uV to 7uV) with mild reduction of rod function
2
1
Susanne Roosing
00448004
FamVIIIPatII9
Han 2024, submitted
3-generation family, 3 affected sibs (2F, M), unaffected parents
F
yes
Netherlands
Turkey
-
-
-
-
retinal disease
see paper; ..., mild dark adaptation problems (some difficulties with driving at night); refraction OD -5.50/-0.75x114, OS -4.50/-1.00x88; best corrected visual acuity OD 20/20, OS 20/20 (47y); Goldmann VF OD and OS relative (peri)central scotoma, periphery intact; pink optic discs, mild attenuation of arterioles, foveal sparing, perifoveal RPE alterations, perimacular lipofuscine depositions, in periphery RPE alterations with a few intraretinal hyperpigmentations; OCT perifoveal ring with abnormal/absent EZ; FAF hyperautoflourescent perifoveal ring, macular region hypoautofluorescent dots, deep hypoautofluorescent areas OS>OD (not present at first visit), perimacular some 'flecks', abnormalities posterior pole seem to have a mild radiant pattern; full field ERG dark adapted responses (isolated rod and mixed), within normal values, light adapted responses (30Hz and single flash) severely reduced; sister diagnosed elsewhere with cone-rod dystrophy, brother diagnosed elsewhere with macular dystrophy, both with severely reduced central vision
1
1
Susanne Roosing
00448005
F1362PatCIC03225
PubMed: Zeitz 2024
2-generation family, 1 affected, unaffected heterozygous parents/relatives
M
yes
France
Tunisia
-
-
-
-
retinal disease
see paper; ..., 20y-night blindness, progressive visual field constriction
1
1
Johan den Dunnen
00448006
F3377PatCIC06376
PubMed: Zeitz 2024
2-generation family, 1 affected, unaffected parents
M
yes
Tunisia
-
-
-
-
-
retinal disease
see paper; ..., cone-rod dystrophy
1
1
Johan den Dunnen
00448007
F5326PatCIC09282
PubMed: Zeitz 2024
2-generation family, 2 affected sisters, unaffected parents
F
yes
France
Tunisia
-
-
-
-
retinal disease
see paper; ...
1
2
Johan den Dunnen
00448008
F7544PatCIC13094
PubMed: Zeitz 2024
2-generation family, affected brother/sister, unaffected parents
F
yes
Tunisia
-
-
-
-
-
retinal disease
see paper; ..., night blindness
1
2
Johan den Dunnen
00448025
W000375
PubMed: Carss 2017
patient
M
-
-
Asia-S
-
-
-
-
retinal disease
-
1
1
Johan den Dunnen
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