(used for variant description)
(last modified June 11, 2014)
This file was created to facilitate the description of sequence variants on transcript NM_000489.3 in the ATRX gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000023.10, covering ATRX transcript NM_000489.3.
(upstream sequence)
. . . . . g.5052
aattctcctgcctgagcctcggcccaacaaaatggcggcggcagcggtgtcg c.-181
. . . . . . g.5112
ctttgtttccgcggctcctgcggcggtggcagtggtagcggcctttgagctgtggggagg c.-121
. . . . . . g.5172
ttccagcagcagctacagtgacgactaagactccagtgcatttctatcgtaaccgggcgc c.-61
. . . . . . g.5232
gggggagcgcagatcggcgcccagcaatcacagaagccgacaaggcgttcaagcgaaaac c.-1
. . | 02 . . . . g.74039
ATGACCGCTGAGCCCATGAG | TGAAAGCAAGTTGAATACATTGGTGCAGAAGCTTCATGAC c.60
M T A E P M S | E S K L N T L V Q K L H D p.20
. . . . . . g.74099
TTCCTTGCACACTCATCAGAAGAATCTGAAGAAACAAGTTCTCCTCCACGACTTGCAATG c.120
F L A H S S E E S E E T S S P P R L A M p.40
. | 03 . . . . . g.92649
AATCAAAACACAG | ATAAAATCAGTGGTTCTGGAAGTAACTCTGATATGATGGAAAACAGC c.180
N Q N T D | K I S G S G S N S D M M E N S p.60
| 04 . . . . . g.93647
AAGGAAGAG | GGAACTAGCTCTTCAGAAAAATCCAAGTCTTCAGGATCGTCACGATCAAAG c.240
K E E | G T S S S E K S K S S G S S R S K p.80
| 05 . . . . . . g.94585
AG | GAAACCTTCAATTGTAACAAAGTATGTAGAATCAGATGATGAAAAACCTTTGGATGAT c.300
R | K P S I V T K Y V E S D D E K P L D D p.100
. . . . . . g.94645
GAAACTGTAAATGAAGATGCGTCTAATGAAAATTCAGAAAATGATATTACTATGCAGAGC c.360
E T V N E D A S N E N S E N D I T M Q S p.120
. | 06 . . . . . g.97343
TTGCCAAAAG | GTACAGTGATTGTACAGCCAGAGCCAGTGCTGAATGAAGACAAAGATGAT c.420
L P K G | T V I V Q P E P V L N E D K D D p.140
. . . . . . g.97403
TTTAAAGGGCCTGAATTTAGAAGCAGAAGTAAAATGAAAACTGAAAATCTCAAAAAACGC c.480
F K G P E F R S R S K M K T E N L K K R p.160
| 07 . . . . . . g.102355
GGAG | AAGATGGGCTTCATGGGATTGTGAGCTGCACTGCTTGTGGACAACAGGTCAATCAT c.540
G E | D G L H G I V S C T A C G Q Q V N H p.180
. . . . . | 08 . g.106227
TTTCAAAAAGATTCCATTTATAGACACCCTTCATTGCAAGTTCTTATTTGTAAG | AATTGC c.600
F Q K D S I Y R H P S L Q V L I C K | N C p.200
. . . . . . g.106287
TTTAAGTATTACATGAGTGATGATATTAGCCGTGACTCAGATGGAATGGATGAACAATGT c.660
F K Y Y M S D D I S R D S D G M D E Q C p.220
| 09 . . . . . . g.106692
AG | GTGGTGTGCGGAAGGTGGAAACTTGATTTGTTGTGACTTTTGCCATAATGCTTTCTGC c.720
R | W C A E G G N L I C C D F C H N A F C p.240
. . . . . . g.106752
AAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAAAC c.780
K K C I L R N L G R K E L S T I M D E N p.260
. . . . . . g.106812
AACCAATGGTATTGCTACATTTGTCACCCAGAGCCTTTGTTGGACTTGGTCACTGCATGT c.840
N Q W Y C Y I C H P E P L L D L V T A C p.280
. . . . . . g.106872
AACAGCGTATTTGAGAATTTAGAACAGTTGTTGCAGCAAAATAAGAAGAAGATAAAAGTT c.900
N S V F E N L E Q L L Q Q N K K K I K V p.300
. . . . . . g.106932
GACAGTGAAAAGAGTAATAAAGTATATGAACATACATCCAGATTTTCTCCAAAGAAGACT c.960
D S E K S N K V Y E H T S R F S P K K T p.320
. . . . . . g.106992
AGTTCAAATTGTAATGGAGAAGAAAAGAAATTAGATGATTCCTGTTCTGGCTCTGTAACC c.1020
S S N C N G E E K K L D D S C S G S V T p.340
. . . . . . g.107052
TACTCTTATTCCGCACTAATTGTGCCCAAAGAGATGATTAAGAAGGCAAAAAAACTGATT c.1080
Y S Y S A L I V P K E M I K K A K K L I p.360
. . . . . . g.107112
GAGACCACAGCCAACATGAACTCCAGTTATGTTAAATTTTTAAAGCAGGCAACAGATAAT c.1140
E T T A N M N S S Y V K F L K Q A T D N p.380
. . . . . . g.107172
TCAGAAATCAGTTCTGCTACAAAATTACGTCAGCTTAAGGCTTTTAAGTCTGTGTTGGCT c.1200
S E I S S A T K L R Q L K A F K S V L A p.400
. . . . . . g.107232
GATATTAAGAAGGCTCATCTTGCATTGGAAGAAGACTTAAATTCCGAGTTTCGAGCGATG c.1260
D I K K A H L A L E E D L N S E F R A M p.420
. . . . . . g.107292
GATGCTGTAAACAAAGAGAAAAATACCAAAGAGCATAAAGTCATAGATGCTAAGTTTGAA c.1320
D A V N K E K N T K E H K V I D A K F E p.440
. . . . . . g.107352
ACAAAAGCACGAAAAGGAGAAAAACCTTGTGCTTTGGAAAAGAAGGATATTTCAAAGTCA c.1380
T K A R K G E K P C A L E K K D I S K S p.460
. . . . . . g.107412
GAAGCTAAACTTTCAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACA c.1440
E A K L S R K Q V D S E H M H Q N V P T p.480
. . . . . . g.107472
GAGGAACAAAGAACAAATAAAAGTACCGGTGGTGAACATAAGAAATCTGATAGAAAAGAA c.1500
E E Q R T N K S T G G E H K K S D R K E p.500
. . . . . . g.107532
GAACCTCAATATGAACCTGCCAACACTTCTGAAGATTTAGACATGGATATTGTGTCTGTT c.1560
E P Q Y E P A N T S E D L D M D I V S V p.520
. . . . . . g.107592
CCTTCCTCAGTTCCAGAAGACATTTTTGAGAATCTTGAGACTGCTATGGAAGTTCAGAGT c.1620
P S S V P E D I F E N L E T A M E V Q S p.540
. . . . . . g.107652
TCAGTTGATCATCAAGGGGATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCT c.1680
S V D H Q G D G S S G T E Q E V E S S S p.560
. . . . . . g.107712
GTAAAATTAAATATTTCTTCAAAAGACAACAGAGGAGGTATTAAATCAAAAACTACAGCT c.1740
V K L N I S S K D N R G G I K S K T T A p.580
. . . . . . g.107772
AAAGTAACAAAAGAATTATATGTTAAACTCACTCCTGTTTCCCTTTCTAATTCCCCAATT c.1800
K V T K E L Y V K L T P V S L S N S P I p.600
. . . . . . g.107832
AAAGGTGCTGATTGTCAGGAAGTTCCACAAGATAAAGATGGCTATAAAAGTTGTGGTCTG c.1860
K G A D C Q E V P Q D K D G Y K S C G L p.620
. . . . . . g.107892
AACCCCAAGTTAGAGAAATGTGGACTTGGACAGGAAAACAGTGATAATGAGCATTTGGTT c.1920
N P K L E K C G L G Q E N S D N E H L V p.640
. . . . . . g.107952
GAAAATGAAGTTTCATTACTTTTAGAGGAATCTGATCTTCGAAGATCCCCACGTGTAAAG c.1980
E N E V S L L L E E S D L R R S P R V K p.660
. . . . . . g.108012
ACTACACCCTTGAGGCGACCGACAGAAACTAACCCTGTAACATCTAATTCAGATGAAGAA c.2040
T T P L R R P T E T N P V T S N S D E E p.680
. . . . . . g.108072
TGTAATGAAACAGTTAAGGAGAAACAAAAACTATCAGTTCCAGTGAGAAAAAAGGATAAG c.2100
C N E T V K E K Q K L S V P V R K K D K p.700
. . . . . . g.108132
CGTAATTCTTCTGACAGTGCTATAGATAATCCTAAGCCTAATAAATTGCCAAAATCTAAG c.2160
R N S S D S A I D N P K P N K L P K S K p.720
. . . . . . g.108192
CAATCAGAGACTGTGGATCAAAATTCAGATTCTGATGAAATGCTAGCAATCCTCAAAGAG c.2220
Q S E T V D Q N S D S D E M L A I L K E p.740
. . . . . . g.108252
GTGAGCAGGATGAGTCACAGTTCTTCTTCAGATACTGATATTAATGAAATTCATACAAAC c.2280
V S R M S H S S S S D T D I N E I H T N p.760
. . . . . . g.108312
CATAAGACTTTGTATGATTTAAAGACTCAGGCGGGGAAAGATGATAAAGGAAAAAGGAAA c.2340
H K T L Y D L K T Q A G K D D K G K R K p.780
. . . . . . g.108372
CGAAAAAGTTCTACATCTGGCTCAGATTTTGATACTAAAAAGGGCAAATCAGCTAAGAGC c.2400
R K S S T S G S D F D T K K G K S A K S p.800
. . . . . . g.108432
TCTATAATTTCTAAAAAGAAACGACAAACCCAGTCTGAGTCTTCTAATTATGACTCAGAA c.2460
S I I S K K K R Q T Q S E S S N Y D S E p.820
. . . . . . g.108492
TTAGAAAAAGAGATAAAGAGCATGAGTAAAATTGGTGCTGCCAGAACCACCAAAAAAAGA c.2520
L E K E I K S M S K I G A A R T T K K R p.840
. . . . . . g.108552
ATTCCAAATACAAAAGATTTTGACTCTTCTGAAGATGAGAAACACAGCAAAAAAGGAATG c.2580
I P N T K D F D S S E D E K H S K K G M p.860
. . . . . . g.108612
GATAATCAAGGGCACAAAAATTTGAAGACCTCACAAGAAGGATCATCTGATGATGCTGAA c.2640
D N Q G H K N L K T S Q E G S S D D A E p.880
. . . . . . g.108672
AGAAAACAAGAGAGAGAGACTTTCTCTTCAGCAGAAGGCACAGTTGATAAAGACACGACC c.2700
R K Q E R E T F S S A E G T V D K D T T p.900
. . . . . . g.108732
ATCATGGAATTAAGAGATCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACTGATGGT c.2760
I M E L R D R L P K K Q Q A S A S T D G p.920
. . . . . . g.108792
GTCGATAAGCTTTCTGGGAAAGAGCAGAGTTTTACTTCTTTGGAAGTTAGAAAAGTTGCT c.2820
V D K L S G K E Q S F T S L E V R K V A p.940
. . . . . . g.108852
GAAACTAAAGAAAAGAGCAAGCATCTCAAAACCAAAACATGTAAAAAAGTACAGGATGGC c.2880
E T K E K S K H L K T K T C K K V Q D G p.960
. . . . . . g.108912
TTATCTGATATTGCAGAGAAATTCCTAAAGAAAGACCAGAGCGATGAAACTTCTGAAGAT c.2940
L S D I A E K F L K K D Q S D E T S E D p.980
. . . . . . g.108972
GATAAAAAGCAGAGCAAAAAGGGAACTGAAGAAAAAAAGAAACCTTCAGACTTTAAGAAA c.3000
D K K Q S K K G T E E K K K P S D F K K p.1000
. . . . . . g.109032
AAAGTAATTAAAATGGAACAACAGTATGAATCTTCATCTGATGGCACTGAAAAGTTACCT c.3060
K V I K M E Q Q Y E S S S D G T E K L P p.1020
. . . . . . g.109092
GAGCGAGAAGAAATTTGTCATTTTCCTAAGGGCATAAAACAAATTAAGAATGGAACAACT c.3120
E R E E I C H F P K G I K Q I K N G T T p.1040
. . . . . . g.109152
GATGGAGAAAAGAAAAGTAAAAAAATAAGAGATAAAACTTCTAAAAAGAAGGATGAATTA c.3180
D G E K K S K K I R D K T S K K K D E L p.1060
. . . . . . g.109212
TCTGATTATGCTGAGAAGTCAACAGGGAAAGGAGATAGTTGTGACTCTTCAGAGGATAAA c.3240
S D Y A E K S T G K G D S C D S S E D K p.1080
. . . . . . g.109272
AAGAGTAAGAATGGAGCATATGGTAGAGAGAAGAAAAGGTGCAAGTTGCTTGGAAAGAGT c.3300
K S K N G A Y G R E K K R C K L L G K S p.1100
. . . . . . g.109332
TCAAGGAAGAGACAAGATTGTTCATCATCTGATACTGAGAAATATTCCATGAAAGAAGAT c.3360
S R K R Q D C S S S D T E K Y S M K E D p.1120
. . . . . . g.109392
GGTTGTAACTCTTCTGATAAGAGACTGAAAAGAATAGAATTGAGGGAAAGAAGAAATTTA c.3420
G C N S S D K R L K R I E L R E R R N L p.1140
. . . . . . g.109452
AGTTCAAAGAGAAATACTAAGGAAATACAAAGTGGCTCATCATCATCTGATGCTGAGGAA c.3480
S S K R N T K E I Q S G S S S S D A E E p.1160
. . . . . . g.109512
AGTTCTGAAGATAATAAAAAGAAGAAGCAAAGAACTTCATCTAAAAAGAAGGCAGTCATT c.3540
S S E D N K K K K Q R T S S K K K A V I p.1180
. . . . . . g.109572
GTCAAGGAGAAAAAGAGAAACTCCCTAAGAACAAGCACTAAAAGGAAGCAAGCTGACATT c.3600
V K E K K R N S L R T S T K R K Q A D I p.1200
. . . . . . g.109632
ACATCCTCATCTTCTTCTGATATAGAAGATGATGATCAGAATTCTATAGGTGAGGGAAGC c.3660
T S S S S S D I E D D D Q N S I G E G S p.1220
. . . . . . g.109692
AGCGATGAACAGAAAATTAAGCCTGTGACTGAAAATTTAGTGCTGTCTTCACATACTGGA c.3720
S D E Q K I K P V T E N L V L S S H T G p.1240
. | 10 . . . . . g.114970
TTTTGCCAATCTTCAG | GAGATGAAGCCTTATCTAAATCAGTGCCTGTCACAGTGGATGAT c.3780
F C Q S S G | D E A L S K S V P V T V D D p.1260
. . | 11 . . . g.126483
GATGATGACGACAATGATCCTGAGAATAG | AATTGCCAAGAAGATGCTTTTAGAAGAAATT c.3840
D D D D N D P E N R | I A K K M L L E E I p.1280
. . . . . . g.126543
AAAGCCAATCTTTCCTCTGATGAGGATGGATCTTCAGATGATGAGCCAGAAGAAGGGAAA c.3900
K A N L S S D E D G S S D D E P E E G K p.1300
. . . . | 12 . . g.127689
AAAAGAACTGGAAAACAAAATGAAGAAAACCCAGGAGATGAGG | AAGCAAAAAATCAAGTC c.3960
K R T G K Q N E E N P G D E E | A K N Q V p.1320
. . . . . . g.127749
AATTCTGAATCAGATTCAGATTCTGAAGAATCTAAGAAGCCAAGATACAGACATAGGCTT c.4020
N S E S D S D S E E S K K P R Y R H R L p.1340
. . . . . . g.127809
TTGCGGCACAAATTGACTGTGAGTGACGGAGAATCTGGAGAAGAAAAAAAGACAAAGCCT c.4080
L R H K L T V S D G E S G E E K K T K P p.1360
. . . . | 13 . . g.134596
AAAGAGCATAAAGAAGTCAAAGGCAGAAACAGAAGAAAGG | TGAGCAGTGAAGATTCAGAA c.4140
K E H K E V K G R N R R K V | S S E D S E p.1380
. . . . . . g.134656
GATTCTGATTTTCAGGAATCAGGAGTTAGTGAAGAAGTTAGTGAATCCGAAGATGAACAG c.4200
D S D F Q E S G V S E E V S E S E D E Q p.1400
. | 14 . . . . . g.137075
CGGCCCAGAACAAG | GTCTGCAAAGAAAGCAGAGTTGGAAGAAAATCAGCGGAGCTATAAA c.4260
R P R T R | S A K K A E L E E N Q R S Y K p.1420
. . . . . | 15. g.138879
CAGAAAAAGAAAAGGCGACGTATTAAGGTTCAAGAAGATTCATCCAGTGAAAACAAG | AGT c.4320
Q K K K R R R I K V Q E D S S S E N K | S p.1440
. . . . . . g.138939
AATTCTGAGGAAGAAGAGGAGGAAAAAGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGAA c.4380
N S E E E E E E K E E E E E E E E E E E p.1460
. . . . . . g.138999
GAGGAGGAGGAAGATGAAAATGATGATTCCAAGTCTCCTGGAAAAGGCAGAAAGAAAATT c.4440
E E E E D E N D D S K S P G K G R K K I p.1480
. . . . . . g.139059
CGGAAGATTCTTAAAGATGATAAACTGAGAACAGAAACACAAAATGCTCTTAAGGAAGAG c.4500
R K I L K D D K L R T E T Q N A L K E E p.1500
. . . . . | 16. g.155175
GAAGAGAGACGAAAACGTATTGCTGAGAGGGAGCGTGAGCGAGAAAAATTGAGAGAG | GTG c.4560
E E R R K R I A E R E R E R E K L R E | V p.1520
. . . . . . g.155235
ATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTTTAGAT c.4620
I E I E D A S P T K C P I T T K L V L D p.1540
. . . . . . g.155295
GAAGATGAAGAAACCAAAGAACCTTTAGTGCAGGTTCATAGAAATATGGTTATCAAATTG c.4680
E D E E T K E P L V Q V H R N M V I K L p.1560
. | 17 . . . . g.156566
AAACCCCATCAAGTAGATG | GTGTTCAGTTTATGTGGGATTGCTGCTGTGAGTCTGTGAAA c.4740
K P H Q V D G | V Q F M W D C C C E S V K p.1580
. . . . . . g.156626
AAAACAAAGAAATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAG c.4800
K T K K S P G S G C I L A H C M G L G K p.1600
| 18 . . . . . g.157570
ACTTTACAG | GTGGTAAGTTTTCTTCATACAGTTCTTTTGTGTGACAAACTGGATTTCAGC c.4860
T L Q | V V S F L H T V L L C D K L D F S p.1620
. . . . . . g.157630
ACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTGGATGAATGAATTTGAGAAG c.4920
T A L V V C P L N T A L N W M N E F E K p.1640
. . . | 19 . . . g.157871
TGGCAAGAGGGATTAAAAGATGATGAGAAGCTTGAG | GTTTCTGAATTAGCAACTGTGAAA c.4980
W Q E G L K D D E K L E | V S E L A T V K p.1660
. . . . . . g.157931
CGTCCTCAGGAGAGAAGCTACATGCTGCAGAGGTGGCAAGAAGATGGTGGTGTTATGATC c.5040
R P Q E R S Y M L Q R W Q E D G G V M I p.1680
. . . . . . g.157991
ATAGGCTATGAGATGTATAGAAATCTTGCTCAAGGAAGGAATGTGAAGAGTCGGAAACTT c.5100
I G Y E M Y R N L A Q G R N V K S R K L p.1700
. . . | 20 . . . g.170745
AAAGAAATATTTAACAAAGCTTTGGTTGATCCAG | GCCCTGATTTTGTTGTTTGTGATGAA c.5160
K E I F N K A L V D P G | P D F V V C D E p.1720
. . . . . . g.170805
GGCCATATTCTAAAAAATGAAGCATCTGCTGTTTCTAAAGCTATGAATTCTATACGATCA c.5220
G H I L K N E A S A V S K A M N S I R S p.1740
. . . . . | 21 . g.172278
AGGAGGAGGATTATTTTAACAGGAACACCACTTCAAAATAACCTAATTGAGT | ATCATTGT c.5280
R R R I I L T G T P L Q N N L I E Y | H C p.1760
. . . . . . g.172338
ATGGTTAATTTTATCAAGGAAAATTTACTTGGATCCATTAAGGAGTTCAGGAATAGATTT c.5340
M V N F I K E N L L G S I K E F R N R F p.1780
. . . . . . g.172398
ATAAATCCAATTCAAAATGGTCAGTGTGCAGATTCTACCATGGTAGATGTCAGAGTGATG c.5400
I N P I Q N G Q C A D S T M V D V R V M p.1800
. . . . | 22 . g.174533
AAAAAACGTGCTCACATTCTCTATGAGATGTTAGCTGGATGTGTTCAG | AGGAAAGATTAT c.5460
K K R A H I L Y E M L A G C V Q | R K D Y p.1820
. . . . . . g.174593
ACAGCATTAACAAAATTCTTGCCTCCAAAACACGAATATGTGTTAGCTGTGAGAATGACT c.5520
T A L T K F L P P K H E Y V L A V R M T p.1840
. . . . | 23 . . g.190700
TCTATTCAGTGCAAGCTCTATCAGTACTACTTAGATCACTTAACAG | GTGTGGGCAATAAT c.5580
S I Q C K L Y Q Y Y L D H L T G | V G N N p.1860
. . . . . . g.190760
AGTGAAGGTGGAAGAGGAAAGGCAGGTGCAAAGCTTTTCCAAGATTTTCAGATGTTAAGT c.5640
S E G G R G K A G A K L F Q D F Q M L S p.1880
. . . . . | 24. g.191433
AGAATATGGACTCATCCTTGGTGTTTGCAGCTAGACTACATTAGCAAAGAAAATAAG | GGT c.5700
R I W T H P W C L Q L D Y I S K E N K | G p.1900
. . . . . . g.191493
TATTTTGATGAAGACAGTATGGATGAATTTATAGCCTCAGATTCTGATGAAACCTCCATG c.5760
Y F D E D S M D E F I A S D S D E T S M p.1920
. . | 25 . . . . g.191704
AGTTTAAGCTCCGATGATTATACAAA | AAAGAAGAAAAAAGGGAAAAAGGGGAAAAAAGAT c.5820
S L S S D D Y T K | K K K K G K K G K K D p.1940
. . . . . . g.191764
AGTAGCTCAAGTGGAAGTGGCAGTGACAATGATGTTGAAGTGATTAAGGTCTGGAATTCA c.5880
S S S S G S G S D N D V E V I K V W N S p.1960
. . . . . . g.191824
AGATCTCGGGGAGGTGGTGAAGGAAATGTGGATGAAACAGGAAACAATCCTTCTGTTTCT c.5940
R S R G G G E G N V D E T G N N P S V S p.1980
. | 26 . . . . . g.197444
TTAAAACTGGAAGAAA | GTAAAGCTACTTCTTCTTCTAATCCAAGCAGCCCAGCTCCAGAC c.6000
L K L E E S | K A T S S S N P S S P A P D p.2000
. . . . . . g.197504
TGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGAGCATTCTGGGAAAATG c.6060
W Y K D F V T D A D A E V L E H S G K M p.2020
. . . . . | 27 . g.201319
GTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT | CCTTGTTTTC c.6120
V L L F E I L R M A E E I G D K V | L V F p.2040
. . . . . . g.201379
AGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTTCTTGAATTAGCTAGTAGGGAG c.6180
S Q S L I S L D L I E D F L E L A S R E p.2060
. . . | 28. . . g.216919
AAGACAGAAGATAAAGATAAACCCCTTATTTATAAAG | GTGAGGGGAAGTGGCTTCGAAAC c.6240
K T E D K D K P L I Y K G | E G K W L R N p.2080
. . . . . . g.216979
ATTGACTATTACCGTTTAGATGGTTCCACTACTGCACAGTCAAGGAAGAAGTGGGCTGAA c.6300
I D Y Y R L D G S T T A Q S R K K W A E p.2100
. . | 29 . . . . g.232436
GAATTTAATGATGAAACTAATGTGAG | AGGACGATTATTTATCATTTCTACTAAAGCAGGA c.6360
E F N D E T N V R | G R L F I I S T K A G p.2120
. . . . . . g.232496
TCTCTAGGAATTAATCTGGTAGCTGCTAATCGAGTAATTATATTCGACGCTTCTTGGAAT c.6420
S L G I N L V A A N R V I I F D A S W N p.2140
. . . . . . g.232556
CCATCTTATGACATCCAGAGTATATTCAGAGTTTATCGCTTTGGACAAACTAAGCCTGTT c.6480
P S Y D I Q S I F R V Y R F G Q T K P V p.2160
. . | 30 . . . . g.233639
TATGTATATAGGTTCTTAGCTCAG | GGAACCATGGAAGATAAGATTTATGATCGGCAAGTA c.6540
Y V Y R F L A Q | G T M E D K I Y D R Q V p.2180
. . . . . . g.233699
ACTAAGCAGTCACTGTCTTTTCGAGTTGTTGATCAGCAGCAGGTGGAGCGTCATTTTACT c.6600
T K Q S L S F R V V D Q Q Q V E R H F T p.2200
. . . . . . g.233759
ATGAATGAGCTTACTGAACTTTATACTTTTGAGCCAGACTTATTAGATGACCCTAATTCA c.6660
M N E L T E L Y T F E P D L L D D P N S p.2220
. . . | 31 . . g.267861
GAAAAGAAGAAGAAGAGGGATACTCCCATGCTGCCAAAG | GATACCATACTTGCAGAGCTC c.6720
E K K K K R D T P M L P K | D T I L A E L p.2240
. . . . . . g.267921
CTTCAGATACATAAAGAACACATTGTAGGATACCATGAACATGATTCTCTTTTGGACCAC c.6780
L Q I H K E H I V G Y H E H D S L L D H p.2260
. . . . . . g.267981
AAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCA c.6840
K E E E E L T E E E R K A A W A E Y E A p.2280
| 32 . . . . . g.268904
GAGAAGAAG | GGACTGACCATGCGTTTCAACATACCAACTGGGACCAATTTACCCCCTGTC c.6900
E K K | G L T M R F N I P T G T N L P P V p.2300
. . . . . . g.268964
AGTTTCAACTCTCAAACTCCTTATATTCCTTTCAATTTGGGAGCCCTGTCAGCAATGAGT c.6960
S F N S Q T P Y I P F N L G A L S A M S p.2320
. | 33 . . . . . g.269788
AATCAACAGCTGGAG | GACCTCATTAATCAAGGAAGAGAAAAAGTTGTAGAAGCAACAAAC c.7020
N Q Q L E | D L I N Q G R E K V V E A T N p.2340
. . . . . | 34 . g.270334
AGTGTGACAGCAGTGAGGATTCAACCTCTTGAGGATATAATTTCAGCTGTA | TGGAAGGAG c.7080
S V T A V R I Q P L E D I I S A V | W K E p.2360
. . . . . . g.270394
AACATGAATCTCTCAGAGGCCCAAGTACAGGCGTTAGCATTAAGTAGACAAGCCAGCCAG c.7140
N M N L S E A Q V Q A L A L S R Q A S Q p.2380
. . . . . . g.270454
GAGCTTGATGTTAAACGAAGAGAAGCAATCTACAATGATGTATTGACAAAACAACAGATG c.7200
E L D V K R R E A I Y N D V L T K Q Q M p.2400
| 35 . . . . . . g.282672
| TTAATCAGCTGTGTTCAGCGAATACTTATGAACAGAAGGCTCCAGCAGCAGTACAATCAG c.7260
| L I S C V Q R I L M N R R L Q Q Q Y N Q p.2420
. . . . . . g.282732
CAGCAACAGCAACAAATGACTTATCAACAAGCAACACTGGGTCACCTCATGATGCCAAAG c.7320
Q Q Q Q Q M T Y Q Q A T L G H L M M P K p.2440
. . . . . . g.282792
CCCCCAAATTTGATCATGAATCCTTCTAACTACCAGCAGATTGATATGAGAGGAATGTAT c.7380
P P N L I M N P S N Y Q Q I D M R G M Y p.2460
. . . . . . g.282852
CAGCCAGTGGCTGGTGGTATGCAGCCACCACCATTACAGCGTGCACCACCCCCAATGAGA c.7440
Q P V A G G M Q P P P L Q R A P P P M R p.2480
. . . g.282891
AGCAAAAATCCAGGACCTTCCCAAGGGAAATCAATGTGA c.7479
S K N P G P S Q G K S M X p.2492
. . . . . . g.282951
ttttgcactaaaagcttaatggattgttaaaatcatagaaagatcttttatttttttagg c.*60
. . . . . . g.283011
aatcaatgacttaacagaactcaactgtataaatagtttggtccccttaaatgccaatct c.*120
. . . . . . g.283071
tccatattagttttactttttttttttttaaatagggcataccatttcttcctgacattt c.*180
. . . . . . g.283131
gtcagtgatgttgcctagaatcttcttacacacgctgagtacagaagatatttcaaattg c.*240
. . . . . . g.283191
ttttcagtgaaaacaagtccttccataatagtaacaactccacagatttcctctctaaat c.*300
. . . . . . g.283251
ttttatgcctgcttttagcaaccataaaattgtcataaaattaataaatttaggaaagaa c.*360
. . . . . . g.283311
taaagatttatatattcattctttacatataaaaacacacagctgagttcttagagttga c.*420
. . . . . . g.283371
ttcctcaagttatgaaatacttttgtacttaatccatttcttgattaaagtgattgaaat c.*480
. . . . . . g.283431
ggttttaatgttcttttgactgaagtctgaaactgggctcctgctttattgtctctgtga c.*540
. . . . . . g.283491
ctgaaagttagaaactgagggttatctttgacacagaattgtgtgcaatattcttaaata c.*600
. . . . . . g.283551
ctactgctctaaaagttggagaagtcttgcagttatcttagcattgtataaacagcctta c.*660
. . . . . . g.283611
agtatagcctaagaagagaattcctttttcttctttagtccttctgccattttttatttt c.*720
. . . . . . g.283671
cagttatatgtgctgaaataattactggtaaaatttcagggttgtggattatcttccaca c.*780
. . . . . . g.283731
catgaattttctctctcctggcacgaatataaagcacatctcttaactgcatggtgccag c.*840
. . . . . . g.283791
tgctaatgcttcatcctgttgctggcagtgggatgtggacttagaaaatcaagttctagc c.*900
. . . . . . g.283851
attttagtaggttaacactgaagttgtggttgttaggttcacaccctgttttataaacaa c.*960
. . . . . . g.283911
catcaaaatggcagaaccattgctgactttaggttcacatgaggaatgtacttttaacaa c.*1020
. . . . . . g.283971
ttcccagtactatcagtattgtgaaataattcctctgaaagataagaatcactggcttct c.*1080
. . . . . . g.284031
atgcgcttcttttctctcatcatcatgttcttttaccccagtttccttacatttttttaa c.*1140
. . . . . . g.284091
attgtttcagagtttgttttttttttagtttagattgtgaggcaattattaaatcaaaat c.*1200
. . . . . . g.284151
taattcatccaatacccctttactagaagttttactagaaaatgtattacattttatttt c.*1260
. . . . . . g.284211
ttcttaatccagttctgcaaaaatgacctataaatttattcatgtacaattttggttact c.*1320
. . . . . . g.284271
tgaattgttaaagaaaacattgtttttgactatgggagtcaactcaacatggcagaacca c.*1380
. . . . . . g.284331
tttttgagatgatgatacaacaggtagtgaaacagcttaagaattccaaaaaaaaaaaaa c.*1440
. . . . . . g.284391
aaaaaaaaaaaaagaaaactgggtttgggctttgctttaggtatcactggattagaatga c.*1500
. . . . . . g.284451
gtttaacattagctaaaactgctttgagttgtttggatgattaagagattgccattttta c.*1560
. . . . . . g.284511
tcttggaagaactagtggtaaaacatccaagagcactaggattgtgatacagaatttgtg c.*1620
. . . . . . g.284571
aggtttggtggatccacgcccctctcccccactttcccatgatgaaatatcactaataaa c.*1680
. . . . . . g.284631
tcctgtatatttagatattatgctagccatgtaatcagatttatttaattgggtggggca c.*1740
. . . . . . g.284691
ggtgtgtatttactttagaaaaaatgaaaaagacaagatttatgagaaatatttgaaggc c.*1800
. . . . . . g.284751
agtacactctggccaactgttaccagttggtatttctacaagttcagaatattttaaacc c.*1860
. . . . . . g.284811
tgatttactagacctgggaattttcaacatggtctaattatttactcaaagacatagatg c.*1920
. . . . . . g.284871
tgaaaattttaggcaaccttctaaatctttttcaccatggatgaaactataacttaaaga c.*1980
. . . . . . g.284931
ataatacttagaagggttaattggaaatcagagtttgaaataaaacttggaccactttgt c.*2040
. . . . . . g.284991
atacactcttctcacttgacattttagctatataatatgtactttgagtataacatcaag c.*2100
. . . . . . g.285051
ctttaacaaatatttaaagacaaaaaaatcacgtcagtaaaatactaaaaggctcatttt c.*2160
. . . . . . g.285111
tatatttgttttagatgttttaaatagttgcaatggattaaaaatgatgatttaaaatgt c.*2220
. . . . . . g.285171
tgcttgtaatacagttttgcctgctaaattctccacattttgtaacctgttttatttctt c.*2280
. . . . . . g.285231
tgggtgtaaagcgtttttgcttagtattgtgatattgtatatgttttgtcccagttgtat c.*2340
. . . . . . g.285291
agtaatgtttcagtccatcatccagctttggctgctgaaatcatacagctgtgaagactt c.*2400
. . . . . . g.285351
gcctttgtttctgttagactgcttttcagttctgtattgagtatcttaagtactgtagaa c.*2460
. . . . . . g.285411
aagatgtcacttcttcctttaaggctgttttgtaatatatataaggactggaattgtgtt c.*2520
. . . . . . g.285471
tttaaagaaaagcattcaagtatgacaatatactatctgtgttttcaccattcaaagtgc c.*2580
. . . . . . g.285531
tgtttagtagttgaaacttaaactatttaatgtcatttaataaagtgaccaaaatgtgtt c.*2640
. . . . . . g.285591
gtgctctttattgtattttcacagctttgaaaatctgtgcacatactgtttcatagaaaa c.*2700
. . . . . . g.285651
tgtatagcttttgttgtcctatataatggtggttcttttgcacatttagttatttaatat c.*2760
. . . . . . g.285711
tgagaggtcacgaagtttggttattgaatctgttatatactaaattctgtaaagggagat c.*2820
. . . . . . g.285771
ctctcatctcaaaaagaatttacataccaggaagtccatgtgtgtttgtgttagttttgg c.*2880
. . . . . . g.285831
atgtctttgtgtaatccagccccatttcctgtttcccaacagctgtaacactcattttaa c.*2940
. . . . . . g.285891
gtcaagcagggctaccaacccacacttgatagaaaagctgcttaccattcagaagcttcc c.*3000
. . . . . . g.285951
ttattacctggcctccaaatgagctgaatattttgtagccttcccttagctatgttcatt c.*3060
. . . . . . g.286011
ttccctccattatcataaaatcagatcgatatttatgtgccccaaacaaaactttaagag c.*3120
. . . . . . g.286071
cagttacattctgtcccagtagcccttgtttcctttgagagtagcatgttgtgaggctat c.*3180
. . . . . . g.286131
agagacttattctaccagtaaaacaggtcaatccttttacatgtttattatactaaaaat c.*3240
. . . . . . g.286191
tatgttcagggtatttactactttatttcaccagactcagtctcaagtgacttggctatc c.*3300
. . . . . . g.286251
tccaaatcagatctacccttagagaataaacatttttctaccgttattttttttcaagtc c.*3360
. . . . . . g.286311
tataatctgagccagtcccaaaggagtgatcaagtttcagaaatgctttcatcttcacaa c.*3420
. . . . . g.286364
cattttatatatactattatatggggtgaataaagttttaaatccgaaatata c.*3473
(downstream sequence)
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