RAR-related orphan receptor A (RORA) - coding DNA reference sequence

(used for variant description)

(last modified June 5, 2018)


This file was created to facilitate the description of sequence variants on transcript NM_134261.2 in the RORA gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_029246.1, covering RORA transcript NM_134261.2.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                                         .         .                g.5025
                                    ggtaccatagagttgctctgaaaac       c.-61

 .         .         .         .         .         .                g.5085
 agaagatagagggagtctcggagctcgccatctccagcgatctctacattgggaaaaaac       c.-1

          .         .         .         .         .         .       g.5145
 ATGGAGTCAGCTCCGGCAGCCCCCGACCCCGCCGCCAGCGAGCCAGGCAGCAGCGGCGCG       c.60
 M  E  S  A  P  A  A  P  D  P  A  A  S  E  P  G  S  S  G  A         p.20

          .         .         .         .         .         .       g.5205
 GACGCGGCCGCCGGCTCCAGGGAGACCCCGCTGAACCAGGAATCCGCCCGCAAGAGCGAG       c.120
 D  A  A  A  G  S  R  E  T  P  L  N  Q  E  S  A  R  K  S  E         p.40

          .         .         .         .       | 02 .         .    g.555631
 CCGCCTGCCCCGGTGCGCAGACAGAGCTATTCCAGCACCAGCAGAG | GTATCTCAGTAACG    c.180
 P  P  A  P  V  R  R  Q  S  Y  S  S  T  S  R  G |   I  S  V  T      p.60

          .       | 03 .         .         .         .         .    g.702496
 AAGAAGACACATACAT | CTCAAATTGAAATTATTCCATGCAAGATCTGTGGAGACAAATCA    c.240
 K  K  T  H  T  S |   Q  I  E  I  I  P  C  K  I  C  G  D  K  S      p.80

          .         .         .         .   | 04     .         .    g.719564
 TCAGGAATCCATTATGGTGTCATTACATGTGAAGGCTGCAAG | GGCTTTTTCAGGAGAAGT    c.300
 S  G  I  H  Y  G  V  I  T  C  E  G  C  K   | G  F  F  R  R  S      p.100

          .         .         .         .         .         .       g.719624
 CAGCAAAGCAATGCCACCTACTCCTGTCCTCGTCAGAAGAACTGTTTGATTGATCGAACC       c.360
 Q  Q  S  N  A  T  Y  S  C  P  R  Q  K  N  C  L  I  D  R  T         p.120

          .         .         .         .         .         .       g.719684
 AGTAGAAACCGCTGCCAACACTGTCGATTACAGAAATGCCTTGCCGTAGGGATGTCTCGA       c.420
 S  R  N  R  C  Q  H  C  R  L  Q  K  C  L  A  V  G  M  S  R         p.140

      | 05   .         .         .         .         .         .    g.722738
 GATG | CTGTAAAATTTGGCCGAATGTCAAAAAAGCAGAGAGACAGCTTGTATGCAGAAGTA    c.480
 D  A |   V  K  F  G  R  M  S  K  K  Q  R  D  S  L  Y  A  E  V      p.160

          .         .         .         .         .         .       g.722798
 CAGAAACACCGGATGCAGCAGCAGCAGCGCGACCACCAGCAGCAGCCTGGAGAGGCTGAG       c.540
 Q  K  H  R  M  Q  Q  Q  Q  R  D  H  Q  Q  Q  P  G  E  A  E         p.180

          .         .         .         .         .         .       g.722858
 CCGCTGACGCCCACCTACAACATCTCGGCCAACGGGCTGACGGAACTTCACGACGACCTC       c.600
 P  L  T  P  T  Y  N  I  S  A  N  G  L  T  E  L  H  D  D  L         p.200

          .         .         .         .         .         .       g.722918
 AGTAACTACATTGACGGGCACACCCCTGAGGGGAGTAAGGCAGACTCCGCCGTCAGCAGC       c.660
 S  N  Y  I  D  G  H  T  P  E  G  S  K  A  D  S  A  V  S  S         p.220

          .         .         .         .         .         .       g.722978
 TTCTACCTGGACATACAGCCTTCCCCAGACCAGTCAGGTCTTGATATCAATGGAATCAAA       c.720
 F  Y  L  D  I  Q  P  S  P  D  Q  S  G  L  D  I  N  G  I  K         p.240

          .         .         .         .         .         .       g.723038
 CCAGAACCAATATGTGACTACACACCAGCATCAGGCTTCTTTCCCTACTGTTCGTTCACC       c.780
 P  E  P  I  C  D  Y  T  P  A  S  G  F  F  P  Y  C  S  F  T         p.260

          .         .         .         . | 06       .         .    g.728694
 AACGGCGAGACTTCCCCAACTGTGTCCATGGCAGAATTAG | AACACCTTGCACAGAATATA    c.840
 N  G  E  T  S  P  T  V  S  M  A  E  L  E |   H  L  A  Q  N  I      p.280

          .         .         .         .         .         .       g.728754
 TCTAAATCGCATCTGGAAACCTGCCAATACTTGAGAGAAGAGCTCCAGCAGATAACGTGG       c.900
 S  K  S  H  L  E  T  C  Q  Y  L  R  E  E  L  Q  Q  I  T  W         p.300

          .         .         .         .   | 07     .         .    g.730654
 CAGACCTTTTTACAGGAAGAAATTGAGAACTATCAAAACAAG | CAGCGGGAGGTGATGTGG    c.960
 Q  T  F  L  Q  E  E  I  E  N  Y  Q  N  K   | Q  R  E  V  M  W      p.320

          .         .         .         .         .         .       g.730714
 CAATTGTGTGCCATCAAAATTACAGAAGCTATACAGTATGTGGTGGAGTTTGCCAAACGC       c.1020
 Q  L  C  A  I  K  I  T  E  A  I  Q  Y  V  V  E  F  A  K  R         p.340

          .         .         .         .         .      | 08  .    g.731441
 ATTGATGGATTTATGGAACTGTGTCAAAATGATCAAATTGTGCTTCTAAAAGCAG | GTTCT    c.1080
 I  D  G  F  M  E  L  C  Q  N  D  Q  I  V  L  L  K  A  G |   S      p.360

          .         .         .         .         .         .       g.731501
 CTAGAGGTGGTGTTTATCAGAATGTGCCGTGCCTTTGACTCTCAGAACAACACCGTGTAC       c.1140
 L  E  V  V  F  I  R  M  C  R  A  F  D  S  Q  N  N  T  V  Y         p.380

          .         .         .         .    | 09    .         .    g.733251
 TTTGATGGGAAGTATGCCAGCCCCGACGTCTTCAAATCCTTAG | GTTGTGAAGACTTTATT    c.1200
 F  D  G  K  Y  A  S  P  D  V  F  K  S  L  G |   C  E  D  F  I      p.400

          .         .         .         .         .         .       g.733311
 AGCTTTGTGTTTGAATTTGGAAAGAGTTTATGTTCTATGCACCTGACTGAAGATGAAATT       c.1260
 S  F  V  F  E  F  G  K  S  L  C  S  M  H  L  T  E  D  E  I         p.420

          .         .         .     | 10   .         .         .    g.734325
 GCATTATTTTCTGCATTTGTACTGATGTCAGCAG | ATCGCTCATGGCTGCAAGAAAAGGTA    c.1320
 A  L  F  S  A  F  V  L  M  S  A  D |   R  S  W  L  Q  E  K  V      p.440

          .         .         .         .         .         .       g.734385
 AAAATTGAAAAACTGCAACAGAAAATTCAGCTAGCTCTTCAACACGTCCTACAGAAGAAT       c.1380
 K  I  E  K  L  Q  Q  K  I  Q  L  A  L  Q  H  V  L  Q  K  N         p.460

          .         .        | 11.         .         .         .    g.736717
 CACCGAGAAGATGGAATACTAACAAAG | TTAATATGCAAGGTGTCTACATTAAGAGCCTTA    c.1440
 H  R  E  D  G  I  L  T  K   | L  I  C  K  V  S  T  L  R  A  L      p.480

          .         .         .         .         .         .       g.736777
 TGTGGACGACATACAGAAAAGCTAATGGCATTTAAAGCAATATACCCAGACATTGTGCGA       c.1500
 C  G  R  H  T  E  K  L  M  A  F  K  A  I  Y  P  D  I  V  R         p.500

          .         .         .         .         .         .       g.736837
 CTTCATTTTCCTCCATTATACAAGGAGTTGTTCACTTCAGAATTTGAGCCAGCAATGCAA       c.1560
 L  H  F  P  P  L  Y  K  E  L  F  T  S  E  F  E  P  A  M  Q         p.520

          .                                                         g.736849
 ATTGATGGGTAA                                                       c.1572
 I  D  G  X                                                         p.523

          .         .         .         .         .         .       g.736909
 atgttatcacctaagcacttctagaatgtctgaagtacaaacatgaaaaacaaacaaaaa       c.*60

          .         .         .         .         .         .       g.736969
 aattaaccgagacactttatatggccctgcacagacctggagcgccacacactgcacatc       c.*120

          .         .         .         .         .         .       g.737029
 ttttggtgatcggggtcaggcaaaggaggggaaacaatgaaaacaaataaaagttgaact       c.*180

          .         .         .         .         .         .       g.737089
 tgtttttctcatgcatatgatttccattatgcctacagatatggaccctttttctgtctt       c.*240

          .         .         .         .         .         .       g.737149
 gacttcttgatcattgacctctgtttacaacaggaggagggtactaaagtcggaggattt       c.*300

          .         .         .         .         .         .       g.737209
 ccttttcttgtagctcactgcccacagactttctacagagtcaccaatctgtcagtaaca       c.*360

          .         .         .         .         .         .       g.737269
 acagagagtccagcaataatcggtgactggtgtgcatagcggaggttgcggcattacttt       c.*420

          .         .         .         .         .         .       g.737329
 gcacaactagctctttgtttcatgaaggaagtttttattttttcaccgattattgccagt       c.*480

          .         .         .         .         .         .       g.737389
 ccgcaggatggcatgaaaagggtccatagcagtagcaacaatagcattataatatattac       c.*540

          .         .         .         .         .         .       g.737449
 agggtaaatgggcatgaagactatatatagctaaaagagatattgtttatatattgtttt       c.*600

          .         .         .         .         .         .       g.737509
 aagtaatataaaatgtagttactggtgtagcttttcctgttgaattgataaggcactttc       c.*660

          .         .         .         .         .         .       g.737569
 attttgcacctttttctttaaattaaatgctagcgtgttcactgtcgtgtcgcatgtgca       c.*720

          .         .         .         .         .         .       g.737629
 ccagaaacacaagtttaactgagaaggcttggaaggtacgttgggaggtatttatgctgc       c.*780

          .         .         .         .         .         .       g.737689
 tgtttacaaaattatttttaagagactggctggtcatatctagaaatcaccacgttggat       c.*840

          .         .         .         .         .         .       g.737749
 tttttttttaacatgtgaatttggaattagaaacggaactctccctaaattatactttgc       c.*900

          .         .         .         .         .         .       g.737809
 tttttggtaagtttaatgatagatgtgtttatgcttcatacaaagttgaatgattgattg       c.*960

          .         .         .         .         .         .       g.737869
 gcgtggtggacatataccatcatgctcattttttttttttaaagctttttaaaatgccac       c.*1020

          .         .         .         .         .         .       g.737929
 ctcatggaggcgagggggaggagaagctcattttacacaattcagtagttaaatatggac       c.*1080

          .         .         .         .         .         .       g.737989
 tcggtctcaacttggaattcttatgctttgagaacaaatcaacaaccagaatatttattg       c.*1140

          .         .         .         .         .         .       g.738049
 gaatctagcttttattataagaaggacccaaagattatatcctgagcaaatgcacactcc       c.*1200

          .         .         .         .         .         .       g.738109
 ccatgtgaggacatgaagtatttactttgtgaatgtttatgttcttggtataatctagga       c.*1260

          .         .         .         .         .         .       g.738169
 accctatgagtttatctcagagtgaactaattctagatttgttgtcaatagatgctataa       c.*1320

          .         .         .         .         .         .       g.738229
 ttcaagaatgttgctctccatatttgaaaaacgatggataggagggtgagggaagcatac       c.*1380

          .         .         .         .         .         .       g.738289
 aatgttgaaccagtttctcttatttaaatattaaatactttaagcctttaaagtgaagtt       c.*1440

          .         .         .         .         .         .       g.738349
 gatgctagctgcaaacatttactcttgtatttatcttcactaggaaactgtggactgtaa       c.*1500

          .         .         .         .         .         .       g.738409
 tttattttattaaatatttagaagattatttggcttgtgtgttcaggtgagaaatactga       c.*1560

          .         .         .         .         .         .       g.738469
 gttgtttttgtttaatttcatggtttttttttttttaatgatccctagtgggggaagggg       c.*1620

          .         .         .         .         .         .       g.738529
 aaaggaatagtctgataaacagatgtgcatattttaaaaacaagtgaccttttgggaatg       c.*1680

          .         .         .         .         .         .       g.738589
 taggcatttagacgatgattttagtcgcactaggggtgggattcaaactactggtcaaag       c.*1740

          .         .         .         .         .         .       g.738649
 accattttgtacagaaaagggaacatctccgatgggtgttaaggtaggagtttccatgca       c.*1800

          .         .         .         .         .         .       g.738709
 gccctttatgtctgagaaatagtctcctctgccattggggtccctgcggaatcttctaca       c.*1860

          .         .         .         .         .         .       g.738769
 ggaattgcagctcttcacgtcatgctaggttaccagcatgggcttcccagagcacttcac       c.*1920

          .         .         .         .         .         .       g.738829
 tctgtttctaactccactgacttttctgacttgtttcttgagggacttggaaaaggggaa       c.*1980

          .         .         .         .         .         .       g.738889
 ggtattattcacacagatgtgtgtatgaagcctaaataacatccaactttttttccaaaa       c.*2040

          .         .         .         .         .         .       g.738949
 acatagtaagagtttaaccataaatagaagagtaatattcctttaaatttcttacaggca       c.*2100

          .         .         .         .         .         .       g.739009
 tgtaaaattttatgtgtttatagagagatgctaactgtcagcatatagtatttatattgg       c.*2160

          .         .         .         .         .         .       g.739069
 ggcaagaagggttaaatcaaatctttaatttaagtaagcatagttcctttaaagatcagt       c.*2220

          .         .         .         .         .         .       g.739129
 agtatttatactctgaaaagagtaccaagcttagttcagttatttattcatccatttttt       c.*2280

          .         .         .         .         .         .       g.739189
 ttctattgtttctcctctggggggaaatggtgttttgtttttgtttgagttttgtgtttt       c.*2340

          .         .         .         .         .         .       g.739249
 agttttttggttttggttttgttttgtttttttgtcattcagattcactaaatttgggga       c.*2400

          .         .         .         .         .         .       g.739309
 tggttttattaaagtatattaacttctttttaaccaaagctttctgaatatgaccagcct       c.*2460

          .         .         .         .         .         .       g.739369
 caggtgctagcgcattaaagagcaactaaacctaattccagtgtcgatttgtgaaataat       c.*2520

          .         .         .         .         .         .       g.739429
 aaaagctaattgaatttctctaagggtgagagagaacataatgatgaacttaaaaagaaa       c.*2580

          .         .         .         .         .         .       g.739489
 ttccttttcccagaagggattctgcatgtacctacaaacaatcatgctctaaccacagta       c.*2640

          .         .         .         .         .         .       g.739549
 atagtcatgccatggtgacattgcttttacggtaaaccaagataggtaatatgatgcttc       c.*2700

          .         .         .         .         .         .       g.739609
 ttcccaggtgtttctgaaagaaaagcagcggtggagcttaagagccaagtccactgattg       c.*2760

          .         .         .         .         .         .       g.739669
 acataataggatggaattgtagacagagacatgctccatgaaacaaggaaacaactgact       c.*2820

          .         .         .         .         .         .       g.739729
 actatttggatctaagttgggatctgatgttaaacaataaattcagtttaaaaaaaatat       c.*2880

          .         .         .         .         .         .       g.739789
 ggagctcagaaaaggatgtgaaaaactttgcattttcctttcttcattattacaaaaaca       c.*2940

          .         .         .         .         .         .       g.739849
 cctatgtgatgacataaaatacttgggtgatatcagaacaattatccttaatagttttta       c.*3000

          .         .         .         .         .         .       g.739909
 taattaaagtttcctaaacttcagtctccaatagtcttttaaggattggaaccacatcac       c.*3060

          .         .         .         .         .         .       g.739969
 tgtcagccccgctgctacaatgcctttgtacaatttttttacataaggcaaataaggctt       c.*3120

          .         .         .         .         .         .       g.740029
 ttgtacaaagcctgaataccttctgttccaatggtgtccaaatggttattatattgtgaa       c.*3180

          .         .         .         .         .         .       g.740089
 aaacctggccttggtcacaatgcaaacaaaagtacagatgaaagtgctttttggacagtt       c.*3240

          .         .         .         .         .         .       g.740149
 tgcaaattgtgttaaagctacggattttttttaaagtgttcagcatcttaacgtgtatta       c.*3300

          .         .         .         .         .         .       g.740209
 aagctatggatttttttttaaagtcttcagcatcctaattcaccctttctaacttaagaa       c.*3360

          .         .         .         .         .         .       g.740269
 aaacatgacttaagacactgcttctaagtttggttgttctttatagtgtggatacccagt       c.*3420

          .         .         .         .         .         .       g.740329
 tatctgtgagcgtatgggggtgggctgagggtcaggtgaggaaggagtgtgtgtgtgtgt       c.*3480

          .         .         .         .         .         .       g.740389
 gtgtgtgtgtgtgtgtgtgtgtgtgatttgcatgtgtatgatgtgtgtgcgtcggaccgc       c.*3540

          .         .         .         .         .         .       g.740449
 ttctaggctactaagtgtcaatggaaaagaaaatgtattcaaaatacttaaatcaaaact       c.*3600

          .         .         .         .         .         .       g.740509
 agaagatggggaaaaaaagatttattctatacaaagccttgtctggaccactttagagag       c.*3660

          .         .         .         .         .         .       g.740569
 acttctatttttttaacccttctataaatatttgatggcacttgaaatattcctgcaata       c.*3720

          .         .         .         .         .         .       g.740629
 aaatgtgatttgtgtaaagaaaaaaagattttgtaatgtgaaacaaagaaagaaagtaat       c.*3780

          .         .         .         .         .         .       g.740689
 gtaattttctaaaaaaaaaaatacaaacaaacaaactttgtattattttcttgatggaat       c.*3840

          .         .         .         .         .         .       g.740749
 ttgtctatctgtctttggaaaactttttatttcattgaatgtgccatagtagaaatgtgt       c.*3900

          .         .         .         .         .         .       g.740809
 gtttttagttttagactaaggaatagctagttgttgtgttccgacattccaaaatgcaaa       c.*3960

          .         .         .         .         .         .       g.740869
 acaacctagtagtatctttcatgaaaaggtttaagtagtatgtaagcttctctcattgtt       c.*4020

          .         .         .         .         .         .       g.740929
 gcttttttgcacatgttcttcattcctctctagtgcaatatgtacatagagcacttgcgg       c.*4080

          .         .         .         .         .         .       g.740989
 gtgtaccttgatccctcagggaaaaatacatatttgtacagttttttggggtttttttgt       c.*4140

          .         .         .         .         .         .       g.741049
 tttttggttttttttgttttgccttttgtttttggctaaggaatgtcgatcgaatcactt       c.*4200

          .         .         .         .         .         .       g.741109
 gttattgttgaggggcagccagataataatcctaaagccactgtttccaacattgattgt       c.*4260

          .         .         .         .         .         .       g.741169
 ttaaatcatatgtccttccaatgctattattttaagataataataaaaagttattttctg       c.*4320

          .         .         .         .         .         .       g.741229
 acagttctttgtgctgactggtgaaaaacaagggtaaataagcaccttataattgactta       c.*4380

          .         .         .         .         .         .       g.741289
 ctgtgaatgacaatccatcttggtatcaacgatagaagccctatcattttggagttgggg       c.*4440

          .         .         .         .         .         .       g.741349
 ttaagagtcagaaacaatgtgctcagggatctcctaaaactcttaaaacagggtggccag       c.*4500

          .         .         .         .         .         .       g.741409
 tactactgggacaaattgtgttttttattattaataataatgataataatactatccctc       c.*4560

          .         .         .         .         .         .       g.741469
 caaggcacaagtgaactatatagaactgcgtgtgtgtaaactctttactctcgtctcatt       c.*4620

          .         .         .         .         .         .       g.741529
 ttgttgagtttagaacttgatgtgctcgtcagtcttgtgtttcaaaacactgaataactt       c.*4680

          .         .         .         .         .         .       g.741589
 ccaaagcaaagttatgccagtgtgttcaaaagataaattaataatgtaccagcaaagagc       c.*4740

          .         .         .         .         .         .       g.741649
 atcattcaaagtatagtccttgcatattccagttaccatttctctaataattaaaatatt       c.*4800

          .         .         .         .         .         .       g.741709
 catgataaatatatatatagcatcatatgttaaaaactatttcaaattctacatattaag       c.*4860

          .         .         .         .         .         .       g.741769
 gatgaaaattttaaaatccagtaataagaggagagacctgcctatcagtacagtgatata       c.*4920

          .         .         .         .         .         .       g.741829
 ggtaaaagatgaaatatgtttttaaaataccagcaattaactattgttttcatgggttct       c.*4980

          .         .         .         .         .         .       g.741889
 cctctagaagcaaaccaaaaattccttcatggaaaacaattcttacttctacatgtgtag       c.*5040

          .         .         .         .         .         .       g.741949
 tttatatctgatgcattacaagagctaatgtttaaagacaaaacaaaacctgcctgtatg       c.*5100

          .         .         .         .         .         .       g.742009
 acagcagcaactcgagccaacatttagtgttacatgttatatttttgaaataccgttttg       c.*5160

          .         .         .         .         .         .       g.742069
 ttatcatattccacatattactttccataaagtcagagaagttcaatgtaattgttggct       c.*5220

          .         .         .         .         .         .       g.742129
 ctgattcttccaccttgggatacacattcacaagaagatttatatattttcttactatga       c.*5280

          .         .         .         .         .         .       g.742189
 tagaggaacataatctgggaaaacttcccatgtctgtaagatgaaaaggatacctttacc       c.*5340

          .         .         .         .         .         .       g.742249
 atgttgtttttgataataaagaatatggaaaatggtagaaatctctcctctctatgtgta       c.*5400

          .         .         .         .         .         .       g.742309
 tttgtatatgtgtgtatacacacacacgttgacatttttacataacatgtgattgccact       c.*5460

          .         .         .         .         .         .       g.742369
 tcttataaagttatgatatagaaccccatgaaaacaactttatattatagatcaaataat       c.*5520

          .         .         .         .         .         .       g.742429
 gtgcccagaaacgcaattgcaacagtaaatcttgatctattggtaagagtctatgataca       c.*5580

          .         .         .         .         .         .       g.742489
 ggtcttcattctatccctaaacataatgttagtaaagaggttccatcagattgtattata       c.*5640

          .         .         .         .         .         .       g.742549
 gagaccttcctattgctatttatttttaagagatgagaagactgactagcaatgtctcca       c.*5700

          .         .         .         .         .         .       g.742609
 cagtgcaattggtttcacttctgggtctgtctgtctgtttgtgtaggtgagatcagtgtt       c.*5760

          .         .         .         .         .         .       g.742669
 gtcaggctctcagaataatttttaaaagaatccagaagcctgacttcacaccaagtagcc       c.*5820

          .         .         .         .         .         .       g.742729
 atcctagatgggcgggggggatctccatgttcaaccaaaccctcagaacttagagcaata       c.*5880

          .         .         .         .         .         .       g.742789
 aatacattcagtcatttatttataaatgaatgacagaatattcaatccaaatagaaacaa       c.*5940

          .         .         .         .         .         .       g.742849
 ccttttgtcagtgatgcaacataacatggagtcttatattgagaaagtgaatatgaatat       c.*6000

          .         .         .         .         .         .       g.742909
 tttaaatagatgcctaggaaatctgtgtttgctgtttacatttaatgtactttgccacat       c.*6060

          .         .         .         .         .         .       g.742969
 tagcagtaccacacttcttttactttcatccttctaagaactaatgaaagatagcttgct       c.*6120

          .         .         .         .         .         .       g.743029
 attagctttgacatgttgcacatgccattatgttgttctctaagaacaactaaattctct       c.*6180

          .         .         .         .         .         .       g.743089
 ccagtgttcatgtgtgattcctttttcatcattattactttaatgtggatgaatactatt       c.*6240

          .         .         .         .         .         .       g.743149
 tctaggaacttgattatcactgaacagattgcatatgtaaatgcagataattcttgagca       c.*6300

          .         .         .         .         .         .       g.743209
 atatagtgaaaatgatttcacaaaaaaaatccatatgtactgtatacatcttcctgaatc       c.*6360

          .         .         .         .         .         .       g.743269
 caaaattctcctgttatccacacagtttgaaatctcatattaaacagtggtaaattttta       c.*6420

          .         .         .         .         .         .       g.743329
 aacattaggacattagctggctgcttctataaatgtacctgtattgtctgcctgctcctt       c.*6480

          .         .         .         .         .         .       g.743389
 ttgtggagatgtgtttttgtattggatgtttgggccaatgggaggcttcaagctacaaca       c.*6540

          .         .         .         .         .         .       g.743449
 tattttcccactttaaataatatttaacatatgacaaaccccagacaaggcttttaatat       c.*6600

          .         .         .         .         .         .       g.743509
 gtataaagaactgcagtgttaggtggtttatttgcaaactgttttcagtgttgtccattt       c.*6660

          .         .         .         .         .         .       g.743569
 ttatggcacctttaacaatattcttgtttccaaagtacaaaaaaaataggttaaataatc       c.*6720

          .         .         .         .         .         .       g.743629
 tagccataactgaatgtcaagcaataaaacaaatgacttttgtgcatagacttaaaaaat       c.*6780

          .         .         .         .         .         .       g.743689
 acaaattttagacatctgcatgtaaatgcaatctcttgtttactgctttcttcaacttga       c.*6840

          .         .         .         .         .         .       g.743749
 gcaatcgattccttatttactattaacttaagaacttgtaacggcctgtaaacattttct       c.*6900

          .         .         .         .         .         .       g.743809
 ctcttactcttctttcaaatttacctgtccctgcttttgagtcataatatttaatgttgt       c.*6960

          .         .         .         .         .         .       g.743869
 tctgcacatctctatacagttaactttttggctttcattctgtatagataagaaaatgtt       c.*7020

          .         .         .         .         .         .       g.743929
 atattataaacagcctactcagtgcaaatatttatctgtttatcaaatccacaatatgct       c.*7080

          .         .         .         .         .         .       g.743989
 gtataataccggttttactatataatctattttagacatagctgtttagaactagagtgt       c.*7140

          .         .         .         .         .         .       g.744049
 gctatttttgtgtttttctgatgtgtggtgctagacaagttacttttgtgaacaacaaaa       c.*7200

          .         .         .         .         .         .       g.744109
 attatcccttttattcctagacaataccacctttgggtcttgttaatttcactgagtata       c.*7260

          .         .         .         .         .         .       g.744169
 actatatatttgtatatatatacatatatatatatatctacctatgcccaactggcagct       c.*7320

          .         .         .         .         .         .       g.744229
 gtatcagagtgctggatttgggacatgcttttctctttaaatacataatatcattatata       c.*7380

          .         .         .         .         .         .       g.744289
 aattattctagagtgtatttaattaggataaaattacttccttagtatggatatttgaca       c.*7440

          .         .         .         .         .         .       g.744349
 tctatagggtgaatttgtttataaatatggctatatggaaacttattagcatttacttta       c.*7500

          .         .         .         .         .         .       g.744409
 tgtttgctacttggctttacagcatatctcctaagctgaaaaataatttgccaggccttc       c.*7560

          .         .         .         .         .         .       g.744469
 aagatcctaaagaaacttgtttaatggagtaatatacttttttttcttattaaggaattg       c.*7620

          .         .         .         .         .         .       g.744529
 tattactggcacctaacacagttgtattcttagctcctattatagataatgggcatttac       c.*7680

          .         .         .         .         .         .       g.744589
 ataaaatatcctagatggcttgatggcagaataaacctttcccctcctacctgagtcatg       c.*7740

          .         .         .         .         .         .       g.744649
 agaaggatggagacgtcctctgccataacatgggccataaagcaaattcgacatgggatg       c.*7800

          .         .         .         .         .         .       g.744709
 ttctgtttcagtatgacctcaaccagttccatgaactgagtgaaggaccttcattttcaa       c.*7860

          .         .         .         .         .         .       g.744769
 agttatttaataagtagcttaattaagcctttctacccattctcccaagatctactggca       c.*7920

          .         .         .         .         .         .       g.744829
 ttattgaaaagcaaagtttatcaaatatctaactaaggatgtagttaaccttattaaata       c.*7980

          .         .         .         .         .         .       g.744889
 ttgattagaattgttctgtaatattactgaatttgtaagatctttagcaaagatttttga       c.*8040

          .         .         .         .         .         .       g.744949
 gcaatttataaatgtagagcaaatgtttctgtttactgcactttttgtaactgaaggtga       c.*8100

          .         .         .         .         .         .       g.745009
 taaattctcaagccatgattattggcttccatgcactgcaatatttatccacaattctag       c.*8160

          .         .         .         .         .         .       g.745069
 acattttccatttttgtggaagagttgctgttaccttaattataaatgcaattgtgtggt       c.*8220

          .         .         .         .         .         .       g.745129
 taatgagagctaatgctagtagttaaccttttaaagtggattggctacagttgagggaga       c.*8280

          .         .         .         .         .         .       g.745189
 aatctcttttaatataaatcacatcattccttaactgcctctcttggaaagagattgaaa       c.*8340

          .         .         .         .         .         .       g.745249
 ccttttttttaaagcacgatttagcatcctaagcttcctgagggtagagattgtatcttt       c.*8400

          .         .         .         .         .         .       g.745309
 ttgcgtctgcacaatggctagcacatgtcagcatttgacaattgttaaatgataacaagt       c.*8460

          .         .         .         .         .         .       g.745369
 gtgccccaattaaaacgtttttcctgggttgttttgttaaatttacaaagtaagccaagc       c.*8520

          .         .         .         .         .         .       g.745429
 cttacggttaacattctcctctacaaccaagtattaaagccacatttaaaaagaccacat       c.*8580

          .         .         .         .         .         .       g.745489
 gaaatgctgattctaattgtgtgtaggtcttgaggattaagcacacaaatttcacaaact       c.*8640

          .         .         .         .         .         .       g.745549
 tctgtttgagtaaacaaactcagccttctgtaaatatacatgcaagtttggaaacagtaa       c.*8700

          .         .         .         .         .         .       g.745609
 tactgtacctataaatatatgctgtctgttttgtgtacagtatgtaaaaactccttttct       c.*8760

          .         .         .         .         .         .       g.745669
 gccacactaaaaatgcaagccatttatgggaatcctaaaactagtattgaactaaaactt       c.*8820

          .         .         .         .         .         .       g.745729
 tgctaatgatctttattagaggatcgtccaacttttcacttaccttgggttttcttttca       c.*8880

          .         .         .         .         .         .       g.745789
 attcactcttacactagtctgcttatttccagctgtttattttattgagtcctgaattta       c.*8940

          .         .         .         .         .         .       g.745849
 aaaaaaaaatattttgattcattttgtaaatacaagctgtacaaaaaagagagatttaat       c.*9000

          .         .         .         .         .         .       g.745909
 gttgtcttttaaatactccaattttcattctaatatgaatgttgttatattgtacttaga       c.*9060

          .         .         .         .         .         .       g.745969
 aactgtacctttaatattacattacctttattaaaagtgcattgaacacatcaattttag       c.*9120

          .         .         .         .         .                 g.746020
 atgtgctttatgtactgttatcctataataaaacttcagcttctaatggaa                c.*9171

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The RAR-related orphan receptor A protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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